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BaseInfo

ncRNA ID novel_ath_miR742
Species Arabidopsis thaliana
Class miRNA
Genome position Chr3:11747723-11747817 [-]
Reference genome TAIR10
Source ERR562746
Length 21
Mature sequence(if miRNA) 75 - UUUAGUUGACGGAAUUGUGGC - 95
Stem-loop(if miRNA) --      U  C          C       ACAAUUC     C   UU
  UUUAGU GA GGAAUUGUGG GGGAUCU       UUCUU UUC  C
  |||||| || |||||||||| |||||||       ||||| |||  U
  AAAUCA CU CCUUAAUACC CCCUAGA       AAGAA AAG  U
CA      C  C          U       -AACCCA     -   UC
Stem-loop sequence UUUAGUUGACGGAAUUGUGGCGGGAUCUACAAUUCUUCUUCUUCUUCUUCUGAAAAGAAACCCAAAGAUCCCUCCAUAAUUCCCUCCACUAAAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY080866.1
ncRNA:21   CGGUGUUAAGGCAGUUGAUUU   1
  *==||||*|||||||||||||
targets:437   AUUACAACUCCGUCAACUAAA   457

2.0 Arabidopsis thaliana At2g29370 mRNA sequence NA coding protein psRNATarget
NM_179801.3
ncRNA:21   CGGUGUUAAGGCAGUUGAUUU   1
  *==||||*|||||||||||||
targets:648   AUUACAACUCCGUCAACUAAA   668

2.0 Arabidopsis thaliana NAD(P)-binding Rossmann-fold superfamily protein mRNA NAD(P)-binding Rossmann-fold superfamily protein(AT2G29370) coding protein psRNATarget