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BaseInfo

ncRNA ID novel_ath_miR735
Species Arabidopsis thaliana
Class miRNA
Genome position Chr3:7820292-7820392 [-]
Reference genome TAIR10
Source ERR562741
Length 22
Mature sequence(if miRNA) 1 - UCUCUACCACAAAACCGCUUUU - 22
Stem-loop(if miRNA) --   G    G                 AAC    UU  U   CUUUUUC
  AAG GGUU UGUGGUAGAGAAAAAAA   AAAA  AA GUU       U
  ||| |||| |||||||||||||||||   ||||  || |||       A
  UUC CCAA ACACCAUCUCUUUUUUU   UUUU  UU CAA       U
UU   G    A                 AGA    UU  C   CACAUCA
Stem-loop sequence AAGGGGUUGUGUGGUAGAGAAAAAAAAACAAAAUUAAUGUUCUUUUUCUAUACUACACAACCUUUUUUUUAGAUUUUUUUCUCUACCACAAAACCGCUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001344884.1
ncRNA:22   UUUUCGCCAAAACACCAUCUCU   1
  =||||=||*||||||||||||=
targets:655   GAAAGUGGGUUUGUGGUAGAGG   676

3.0 Arabidopsis thaliana F-box/RNI-like/FBD-like domains-containing protein partial mRNA F-box/RNI-like/FBD-like domains-containing protein(AT5G50270) coding protein psRNATarget
NM_001344885.1
ncRNA:22   UUUUCGCCAAAACACCAUCUCU   1
  =||||=||*||||||||||||=
targets:655   GAAAGUGGGUUUGUGGUAGAGG   676

3.0 Arabidopsis thaliana F-box/RNI-like/FBD-like domains-containing protein partial mRNA F-box/RNI-like/FBD-like domains-containing protein(AT5G50270) coding protein psRNATarget