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BaseInfo

ncRNA ID	novel_ath_miR731
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr3:10888680-10888731 [+]
Reference genome	TAIR10
Source	ERR562732;ERR562745
Length	24
Mature sequence(if miRNA)	29 - AUUAUCGUCUUGACUUUUUUGCCU - 52
Stem-loop(if miRNA)	--    C          UA     CG   GCAG AAAGUUAGGA  AUAAU  C   |||| ||||||||||  |||||   CGUU UUUCAGUUCU  UAUUA  C UC    U          GC     UU
Stem-loop sequence	GCAGCAAAGUUAGGAUAAUAAUCGCCUUAUUAUCGUCUUGACUUUUUUGCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BX825610.1	ncRNA:24   UCCGUUUUUUCAGUUCUGCUAUUA   1   =*||*|||=||||||||||||||* targets:512   GAGCUAAAGAGUCAAGACGAUAAG   535 Target Full Sequence	2.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL48ZH01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
NM_114616.3	ncRNA:24   UCCGUUUUUUCAGUUCUGCUAUUA   1   *|**=||=||||||||=||||||| targets:496   CGUGGAAGAAGUCAAGGCGAUAAU   519 Target Full Sequence	2.5	Arabidopsis thaliana Calcium-binding EF-hand family protein mRNA	Calcium-binding EF-hand family protein(AT3G47480)	coding protein	psRNATarget
BT012166.1	ncRNA:24   UCCGUUUUUUCAGUUCUGCUAUUA   1   *|**=||=||||||||=||||||| targets:237   CGUGGAAGAAGUCAAGGCGAUAAU   260 Target Full Sequence	2.5	Arabidopsis thaliana At3g47480 gene, complete cds	NA	coding protein	psRNATarget
NM_001338383.1	ncRNA:24   UCCGUUUUUUCAGUUCUGCUAUUA   1   =*||*|=|=||||||||||||||* targets:872   GAGCUAGAGAGUCAAGACGAUAAG   895 Target Full Sequence	3.0	Arabidopsis thaliana KIP-related protein 6 (KRP6), mRNA	KIP-related protein 6(KRP6)	coding protein	psRNATarget
NM_112802.4	ncRNA:24   UCCGUUUUUUCAGUUCUGCUAUUA   1   =*||*|=|=||||||||||||||* targets:780   GAGCUAGAGAGUCAAGACGAUAAG   803 Target Full Sequence	3.0	Arabidopsis thaliana KIP-related protein 6 (KRP6), mRNA	KIP-related protein 6(KRP6)	coding protein	psRNATarget
AF106705.2	ncRNA:24   UCCGUUUUUUCAGUUCUGCUAUUA   1   =*||*|=|=||||||||||||||* targets:506   GAGCUAGAGAGUCAAGACGAUAAG   529 Target Full Sequence	3.0	Arabidopsis thaliana cyclin dependent kinase inhibitor (ACK1) mRNA, complete cds	NA	coding protein	psRNATarget
AK229307.1	ncRNA:24   UCCGUUUUUUCAGUUCUGCUAUUA   1   =*||*|=|=||||||||||||||* targets:524   GAGCUAGAGAGUCAAGACGAUAAG   547 Target Full Sequence	3.0	Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-57-G19	NA	coding protein	psRNATarget
NM_202609.3	ncRNA:24   UCCGUUUUUUCAGUUCUGCUAUUA   1   =*||*|=|=||||||||||||||* targets:506   GAGCUAGAGAGUCAAGACGAUAAG   529 Target Full Sequence	3.0	Arabidopsis thaliana KIP-related protein 6 (KRP6), mRNA	KIP-related protein 6(KRP6)	coding protein	psRNATarget
BX826283.1	ncRNA:24   UCCGUUUUUUCAGUUCUGCUAUUA   1   =*||*|=|=||||||||||||||* targets:506   GAGCUAGAGAGUCAAGACGAUAAG   529 Target Full Sequence	3.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL9ZE05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX826140.1	ncRNA:24   UCCGUUUUUUCAGUUCUGCUAUUA   1   =*||*|=|=||||||||||||||* targets:506   GAGCUAGAGAGUCAAGACGAUAAG   529 Target Full Sequence	3.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL87ZB03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AJ301557.1	ncRNA:24   UCCGUUUUUUCAGUUCUGCUAUUA   1   =*||*|=|=||||||||||||||* targets:484   GAGCUAGAGAGUCAAGACGAUAAG   507 Target Full Sequence	3.0	Arabidopsis thaliana mRNA for cyclin-dependent kinase inhibitor 6 (krp6 gene)	NA	coding protein	psRNATarget
BT030623.1	ncRNA:24   UCCGUUUUUUCAGUUCUGCUAUUA   1   =*||*|=|=||||||||||||||* targets:484   GAGCUAGAGAGUCAAGACGAUAAG   507 Target Full Sequence	3.0	Arabidopsis thaliana unknown protein (At3g19150) mRNA, complete cds	NA	coding protein	psRNATarget