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BaseInfo

ncRNA ID	novel_ath_miR725
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr2:4765308-4765421 [-]
Reference genome	TAIR10
Source	ERR1337969
Length	19
Mature sequence(if miRNA)	1 - UUUCUUGUUAUUAUCAUCA - 19
Stem-loop(if miRNA)	--     -CA    U        G         ----C   - UG      AACC    C   AUGGU   GGCA GAAAGAAG UGAGAAUUG     AUC G  AAUCAA    UCCA A   |||||   |||| |||||||| |||||||||     ||| |  ||||||    |||| A   UACUA   UUGU CUUUUUUC AUUCUUAAC     UAG C  UUAGUU    AGGU G AC     UUA    U        -         ACAAC   U CU      CUAU    C
Stem-loop sequence	AUGGUCAGGCAUGAAAGAAGGUGAGAAUUGCAUCGUGAAUCAAAACCUCCACAAGCUGGAUAUCUUGAUUUCCUGAUCAACACAAUUCUUACUUUUUUCUUGUUAUUAUCAUCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_201865.1	ncRNA:19   ACUACUAUUAUUGUUCUUU   1   |||||||=||||||||||| targets:165   UGAUGAUGAUAACAAGAAA   183 Target Full Sequence	1.5	Arabidopsis thaliana FBD-like domain family protein partial mRNA	FBD-like domain family protein(AT2G33796)	coding protein	psRNATarget
NM_001345106.1	ncRNA:19   ACUACUAUUAUUGUUCUUU   1   ||||||||||||=|||||= targets:1487   UGAUGAUAAUAAUAAGAAG   1505 Target Full Sequence	2.5	Arabidopsis thaliana mitogen-activated protein kinase kinase kinase 15 (MAPKKK15), partial mRNA	mitogen-activated protein kinase kinase kinase 15(MAPKKK15)	coding protein	psRNATarget
NM_124891.2	ncRNA:19   ACUACUAUUAUUGUUCUUU   1   ||||||||||||=|||||= targets:1455   UGAUGAUAAUAAUAAGAAG   1473 Target Full Sequence	2.5	Arabidopsis thaliana mitogen-activated protein kinase kinase kinase 15 (MAPKKK15), partial mRNA	mitogen-activated protein kinase kinase kinase 15(MAPKKK15)	coding protein	psRNATarget
NM_001334627.1	ncRNA:19   ACUACUAUUAUUGUUCUUU   1   ||||||||*|||||||||= targets:1528   UGAUGAUACUAACAAGAAG   1546 Target Full Sequence	2.5	Arabidopsis thaliana Galactose oxidase/kelch repeat superfamily protein mRNA	Galactose oxidase/kelch repeat superfamily protein(AT1G74150)	coding protein	psRNATarget
NM_001334629.1	ncRNA:19   ACUACUAUUAUUGUUCUUU   1   ||||||||*|||||||||= targets:1399   UGAUGAUACUAACAAGAAG   1417 Target Full Sequence	2.5	Arabidopsis thaliana Galactose oxidase/kelch repeat superfamily protein mRNA	Galactose oxidase/kelch repeat superfamily protein(AT1G74150)	coding protein	psRNATarget
NM_001334628.1	ncRNA:19   ACUACUAUUAUUGUUCUUU   1   ||||||||*|||||||||= targets:1377   UGAUGAUACUAACAAGAAG   1395 Target Full Sequence	2.5	Arabidopsis thaliana Galactose oxidase/kelch repeat superfamily protein partial mRNA	Galactose oxidase/kelch repeat superfamily protein(AT1G74150)	coding protein	psRNATarget
NM_001334630.1	ncRNA:19   ACUACUAUUAUUGUUCUUU   1   ||||||||*|||||||||= targets:1302   UGAUGAUACUAACAAGAAG   1320 Target Full Sequence	2.5	Arabidopsis thaliana Galactose oxidase/kelch repeat superfamily protein mRNA	Galactose oxidase/kelch repeat superfamily protein(AT1G74150)	coding protein	psRNATarget
NM_106075.4	ncRNA:19   ACUACUAUUAUUGUUCUUU   1   ||||||||*|||||||||= targets:1386   UGAUGAUACUAACAAGAAG   1404 Target Full Sequence	2.5	Arabidopsis thaliana Galactose oxidase/kelch repeat superfamily protein partial mRNA	Galactose oxidase/kelch repeat superfamily protein(AT1G74150)	coding protein	psRNATarget
NM_001334631.1	ncRNA:19   ACUACUAUUAUUGUUCUUU   1   ||||||||*|||||||||= targets:1087   UGAUGAUACUAACAAGAAG   1105 Target Full Sequence	2.5	Arabidopsis thaliana Galactose oxidase/kelch repeat superfamily protein mRNA	Galactose oxidase/kelch repeat superfamily protein(AT1G74150)	coding protein	psRNATarget
NM_122487.1	ncRNA:19   ACUACUAUUAUUGUUCUUU   1   |*|||||=||||||||||| targets:1260   UCAUGAUGAUAACAAGAAA   1278 Target Full Sequence	2.5	Arabidopsis thaliana F-box/RNI-like superfamily protein partial mRNA	F-box/RNI-like superfamily protein(AT5G25860)	coding protein	psRNATarget