Search result

BaseInfo

ncRNA ID novel_ath_miR724
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:24142966-24143050 [-]
Reference genome TAIR10
Source ERR1337969
Length 21
Mature sequence(if miRNA) 65 - UGGAACCAAAACUAUGGAUAA - 85
Stem-loop(if miRNA) --U        A         AA   A  UA      GA  G
   GGAACCAA ACUAUGGAU  UUU UU  AGACCG  GA A
   |||||||| |||||||||  ||| ||  ||||||  || U
   CCUUGGUU UGGUACCUA  AAA GA  UCUGGC  UU U
GUU        C         AC   C  GC      UG  A
Stem-loop sequence UGGAACCAAAACUAUGGAUAAUUUAUUUAAGACCGGAGAGAUUAUUGUCGGUCUCGAGCAAACAAUCCAUGGUCUUGGUUCCUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001343787.1
ncRNA:21   AAUAGGUAUCAAAACCAAGGU   1
  **||||=|*||||||||||||
targets:1561   GGAUCCGUUGUUUUGGUUCCA   1581

2.5 Arabidopsis thaliana acyl-activating enzyme 17 (AAE17), mRNA acyl-activating enzyme 17(AAE17) coding protein psRNATarget
NM_122211.3
ncRNA:21   AAUAGGUAUCAAAACCAAGGU   1
  **||||=|*||||||||||||
targets:1561   GGAUCCGUUGUUUUGGUUCCA   1581

2.5 Arabidopsis thaliana acyl-activating enzyme 17 (AAE17), mRNA acyl-activating enzyme 17(AAE17) coding protein psRNATarget
BX831135.1
ncRNA:21   AAUAGGUAUCAAAACCAAGGU   1
  **||||=|*||||||||||||
targets:1436   GGAUCCGUUGUUUUGGUUCCA   1456

2.5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS60ZB03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
AY250844.1
ncRNA:21   AAUAGGUAUCAAAACCAAGGU   1
  **||||=|*||||||||||||
targets:1205   GAAUCCGUUGUUUUGGUUCCA   1225

2.5 Arabidopsis thaliana acyl-activating enzyme 17 (At5g23050) mRNA, complete cds NA coding protein psRNATarget