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BaseInfo

ncRNA ID novel_ath_miR723
Species Arabidopsis thaliana
Class miRNA
Genome position Chr5:14798635-14798796 [-]
Reference genome TAIR10
Source ERR1337969
Length 24
Mature sequence(if miRNA) 1 - AAUCAUCGACUAGUCGGAAAGAUG - 24
Stem-loop(if miRNA) --     A                           CU         A     A                   GAAGAAAAG
  UUUUU CGACUAGUUGAUGAUUGCUUUGGUCAA  UUUCAAAGA UCACA UUUUUUUUAGUUCCUCCUU         G
  ||||| |||||||||||||||||||||||||||  ||||||||| ||||| |||||||||||||||||||
  AGAAA GCUGAUCAGCUACUAACGAAACCAGUU  AAGGUUUCU AGUGU AAAGGAAGUUAAGGAGGAA         U
GU     G                           AC         C     A                   GAAAACAAC
Stem-loop sequence UUUUUACGACUAGUUGAUGAUUGCUUUGGUCAACUUUUCAAAGAAUCACAAUUUUUUUUAGUUCCUCCUUGAAGAAAAGGUCAACAAAAGAAGGAGGAAUUGAAGGAAAAUGUGACUCUUUGGAACAUUGACCAAAGCAAUCAUCGACUAGUCGGAAAGAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001339374.1
ncRNA:24   GUAGAAAGGCUGAUCAGCUACUAA   1
  ==|*|||*=|*|||||||||||||
targets:286   UGUGUUUGUGUCUAGUCGAUGAUU   309

3.0 Arabidopsis thaliana xyloglucan endotransglucosylase/hydrolase 11 (XTH11), mRNA xyloglucan endotransglucosylase/hydrolase 11(XTH11) coding protein psRNATarget