ncRNA ID | novel_ath_miR723 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr5:14798635-14798796 [-] |
Reference genome | TAIR10 |
Source | ERR1337969 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUCAUCGACUAGUCGGAAAGAUG - 24 |
Stem-loop(if miRNA) |
--     A                           CU         A     A                   GAAGAAAAG   UUUUU CGACUAGUUGAUGAUUGCUUUGGUCAA  UUUCAAAGA UCACA UUUUUUUUAGUUCCUCCUU         G   ||||| |||||||||||||||||||||||||||  ||||||||| ||||| |||||||||||||||||||   AGAAA GCUGAUCAGCUACUAACGAAACCAGUU  AAGGUUUCU AGUGU AAAGGAAGUUAAGGAGGAA         U GU     G                           AC         C     A                   GAAAACAAC |
Stem-loop sequence | UUUUUACGACUAGUUGAUGAUUGCUUUGGUCAACUUUUCAAAGAAUCACAAUUUUUUUUAGUUCCUCCUUGAAGAAAAGGUCAACAAAAGAAGGAGGAAUUGAAGGAAAAUGUGACUCUUUGGAACAUUGACCAAAGCAAUCAUCGACUAGUCGGAAAGAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001339374.1 |
|
3.0 | Arabidopsis thaliana xyloglucan endotransglucosylase/hydrolase 11 (XTH11), mRNA | xyloglucan endotransglucosylase/hydrolase 11(XTH11) | coding protein | psRNATarget |