ncRNA ID | novel_ath_miR715 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr1:16863309-16863390 [-] |
Reference genome | TAIR10 |
Source | SRR3992494 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUUCUGGGCUGUUGACUAUAAUAC - 24 |
Stem-loop(if miRNA) |
--    C   -    C   G     -CUC       ---    G   AUUG UAG CAAC GUC GGAAG    UUUUACG   CAGG U   |||| ||| |||| ||| |||||    |||||||   ||||   UAAU AUC GUUG CGG UCUUU    AAAAUGC   GUUC C CA    -   A    U   G     CUUC       AUG    U |
Stem-loop sequence | AUUGCUAGCAACCGUCGGGAAGCUCUUUUACGCAGGGUCUCUUGGUACGUAAAACUUCUUUCUGGGCUGUUGACUAUAAUAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
DQ056562.1 |
|
2.5 | Arabidopsis thaliana tryptophan/tyrosine permease family protein (At2g33260) mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_128886.2 |
|
2.5 | Arabidopsis thaliana Tryptophan/tyrosine permease mRNA | Tryptophan/tyrosine permease(AT2G33260) | coding protein | psRNATarget | |||||||||
NM_001336441.1 |
|
2.5 | Arabidopsis thaliana Tryptophan/tyrosine permease mRNA | Tryptophan/tyrosine permease(AT2G33260) | coding protein | psRNATarget |