ncRNA ID | novel_ath_miR710 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr5:4691034-4691129 [+] |
Reference genome | TAIR10 |
Source | SRR3992492;SRR3992494 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AGGGUUGAUAUGAGAACACAC - 21 |
Stem-loop(if miRNA) |
--    U    A          C   U   CAAC       ---         AGGG UGAU UGAGAACACA GAG AAU    GGCUGUA   AUGACGC   |||| |||| |||||||||| ||| |||    |||||||   ||||||U   UCCC ACUG ACUCUUGUGU CUU UUG    UCGACAU   UACUGCA CG    C    G          A   -   -CUC       UGU       |
Stem-loop sequence | AGGGUUGAUAUGAGAACACACGAGUAAUCAACGGCUGUAAUGACGCUACGUCAUUGUUACAGCUCUCGUUUUCAUGUGUUCUCAGGUCACCCCUGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_121459.5 |
|
0.0 | Arabidopsis thaliana Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein mRNA | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein(AT5G14550) | coding protein | psRNATarget | |||||||||
NM_123150.1 |
|
2.5 | Arabidopsis thaliana Protein with RING/U-box and TRAF-like domain partial mRNA | Protein with RING/U-box and TRAF-like domain(AT5G37910) | coding protein | psRNATarget |