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BaseInfo

ncRNA ID novel_ath_miR710
Species Arabidopsis thaliana
Class miRNA
Genome position Chr5:4691034-4691129 [+]
Reference genome TAIR10
Source SRR3992492;SRR3992494
Length 21
Mature sequence(if miRNA) 1 - AGGGUUGAUAUGAGAACACAC - 21
Stem-loop(if miRNA) --    U    A          C   U   CAAC       ---      
  AGGG UGAU UGAGAACACA GAG AAU    GGCUGUA   AUGACGC
  |||| |||| |||||||||| ||| |||    |||||||   ||||||U
  UCCC ACUG ACUCUUGUGU CUU UUG    UCGACAU   UACUGCA
CG    C    G          A   -   -CUC       UGU      
Stem-loop sequence AGGGUUGAUAUGAGAACACACGAGUAAUCAACGGCUGUAAUGACGCUACGUCAUUGUUACAGCUCUCGUUUUCAUGUGUUCUCAGGUCACCCCUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_121459.5
ncRNA:21   CACACAAGAGUAUAGUUGGGA   1
  |||||||||||||||||||||
targets:1725   GUGUGUUCUCAUAUCAACCCU   1745

0.0 Arabidopsis thaliana Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein mRNA Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein(AT5G14550) coding protein psRNATarget
NM_123150.1
ncRNA:21   CACACAAGAGUAUAGUUGGGA   1
  |*|*||||||||||||||=||
targets:638   GAGAGUUCUCAUAUCAACUCU   658

2.5 Arabidopsis thaliana Protein with RING/U-box and TRAF-like domain partial mRNA Protein with RING/U-box and TRAF-like domain(AT5G37910) coding protein psRNATarget