ncRNA ID | novel_ath_miR702 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr2:11555458-11555663 [-] |
Reference genome | TAIR10 |
Source | SRR3992490 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUUUUGGAUUUUGAAGUUUAGACC - 24 |
Stem-loop(if miRNA) |
--UGA           AUU       C   A  - G   UUUU          AUCUAAAAAUACACAAAA   ACUAAUAUAUCCAAAAAAAUCCUAAUAUUUUCUAUAUAUAA      AAAUUUCAAAA   UCCAAAA AAC CG A UAG    GCUUGAAUAU                  AUA                                         G      |||||||||||   ||||||| ||| || | |||    ||||||||||                  |||      UUUGAAGUUUU   AGGUUUU UUG GC U GUC    UGGACUUAUG                  UAG                                         U CCAGA           ---       -   A  U G   ---U          ----------------CA   GUUUGUAUAGAGUUUAUAUUUAUAUAUAAUCAAUGUAAAUA |
Stem-loop sequence | UGAAAAUUUCAAAAAUUUCCAAAACAACACGAGUAGUUUUGCUUGAAUAUAUCUAAAAAUACACAAAAAUAACUAAUAUAUCCAAAAAAAUCCUAAUAUUUUCUAUAUAUAAGUAUAAAUGUAACUAAUAUAUAUUUAUAUUUGAGAUAUGUUUGGAUACGUAUUCAGGUUCUGGUUCGAGUUUUUUGGAUUUUGAAGUUUAGACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BX818629.1 |
|
1.0 | Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL89ZB11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) | NA | coding protein | psRNATarget |