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BaseInfo

ncRNA ID novel_ath_miR700
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:16240608-16240719 [+]
Reference genome TAIR10
Source SRR3992488
Length 24
Mature sequence(if miRNA) 1 - UUUUUAUAUUGUUGAGCCGAUUGG - 24
Stem-loop(if miRNA) --    U     GU       AU G  -     UG    U    C  UUAU      G
  UUUU AUAUU  UGAGCCG  U GC AGCAG  GCGG CUUG CC    GUAAUC A
  |||| |||||  |||||||  | || |||||  |||| |||| ||    ||||||
  AAAG UAUAG  AUUCGGC  A UG UUGUU  UGUU GAAU GG    UAUUAG A
UU    U     UU       -C G  A     UU    U    U  --UC      A
Stem-loop sequence UUUUUAUAUUGUUGAGCCGAUUGGCAGCAGUGGCGGUCUUGCCCUUAUGUAAUCGAAAGAUUAUCUGGUUAAGUUUGUUUUUGUUAGUGACCGGCUUAUUGAUAUUGAAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AF344447.1
ncRNA:24   GGUUAGCCGAGUUGUUAUAUUUUU   1
  =|*|||||*|||||||||*|||||
targets:2070   UCUAUCGGGUCAACAAUAAAAAAA   2093

2.5 Arabidopsis thaliana SUVH4 (SUVH4) mRNA, complete cds NA coding protein psRNATarget