ncRNA ID | novel_ath_miR700 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr1:16240608-16240719 [+] |
Reference genome | TAIR10 |
Source | SRR3992488 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUUUUAUAUUGUUGAGCCGAUUGG - 24 |
Stem-loop(if miRNA) |
--    U     GU       AU G  -     UG    U    C  UUAU      G   UUUU AUAUU  UGAGCCG  U GC AGCAG  GCGG CUUG CC    GUAAUC A   |||| |||||  |||||||  | || |||||  |||| |||| ||    ||||||   AAAG UAUAG  AUUCGGC  A UG UUGUU  UGUU GAAU GG    UAUUAG A UU    U     UU       -C G  A     UU    U    U  --UC      A |
Stem-loop sequence | UUUUUAUAUUGUUGAGCCGAUUGGCAGCAGUGGCGGUCUUGCCCUUAUGUAAUCGAAAGAUUAUCUGGUUAAGUUUGUUUUUGUUAGUGACCGGCUUAUUGAUAUUGAAAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AF344447.1 |
|
2.5 | Arabidopsis thaliana SUVH4 (SUVH4) mRNA, complete cds | NA | coding protein | psRNATarget |