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BaseInfo

ncRNA ID novel_ath_miR699
Species Arabidopsis thaliana
Class miRNA
Genome position Chr4:5610722-5610818 [-]
Reference genome TAIR10
Source SRR3992486
Length 22
Mature sequence(if miRNA) 1 - UGAAGAUUUUGUGAAGUGAAGA - 22
Stem-loop(if miRNA) --         -   C      G       -       G       GAA
  UUUACUUCA AAA UCUUCA AAAGUUU CAAUUUU GGGUUUU   G
  ||||||||| ||| |||||| ||||||| ||||||| |||||||   U
  AAGUGAAGU UUU AGAAGU UUUCAAA GUUGAAA CCUAAAG   U
AG         G   U      A       A       A       AUG
Stem-loop sequence UUUACUUCAAAACUCUUCAGAAAGUUUCAAUUUUGGGGUUUUGAAGUUGUAGAAAUCCAAAAGUUGAAAACUUUAUGAAGAUUUUGUGAAGUGAAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_115268.2
ncRNA:22   AGAAGU-GAAGUGUUUUAGAAGU   1
  ||||||-||*|||||||||||||
targets:1494   UCUUCAUCUACACAAAAUCUUCA   1516

3.0 Arabidopsis thaliana Concanavalin A-like lectin family protein mRNA Concanavalin A-like lectin family protein(AT3G54080) coding protein psRNATarget