Search result

BaseInfo

ncRNA ID novel_ath_miR691
Species Arabidopsis thaliana
Class miRNA
Genome position Chr2:14683075-14683284 [+]
Reference genome TAIR10
Source SRR3954849
Length 23
Mature sequence(if miRNA) 188 - UAAAACUCUUUUAAAAUCUCUUA - 210
Stem-loop(if miRNA) --                     C  U         GA        -                    A  AUUUGUAAA      U         A     G     AAA
  AGAGAUUUUAAAAGGGUUUUA AA AUUUAUAAG  AUUUUAAA GGAUUUUAAAAGAUUUACAA GA         GAUUUU AAAGGGUUU AAAGU UUUUG   G
  ||||||||||||||||||||| || |||||||||  |||||||| |||||||||||||||||||| ||         |||||| ||||||||| ||||| |||||   A
  UCUCUAAAAUUUUCUCAAAAU UU UAAAUGUUC  UAAAAUUU CCUAAAAUUUUUUAAAUGUU CU         CUAAAA UUUCCCAAA UUUUA GGAAC   U
AU                     U  C         UC        U                    -  ---------      U         A     G     AUU
Stem-loop sequence AGAGAUUUUAAAAGGGUUUUACAAUAUUUAUAAGGAAUUUUAAAGGAUUUUAAAAGAUUUACAAAGAAUUUGUAAAGAUUUUUAAAGGGUUUAAAAGUGUUUUGAAAGAUUUACAAGGGAUUUUAAAACCCUUUUAAAAUCUCUUGUAAAUUUUUUAAAAUCCUUUUAAAAUCUCUUGUAAAUCUUUUAAAACUCUUUUAAAAUCUCUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_114323.4
ncRNA:23   AUUCUCUAAAAUUUUCUCAAAAU   1
  *|||=|||||||||||=||||||
targets:2486   CAAGGGAUUUUAAAAGGGUUUUA   2508

2.5 Arabidopsis thaliana fatty acid reductase 5 (FAR5), mRNA fatty acid reductase 5(FAR5) coding protein psRNATarget
NM_114323.4
ncRNA:23   AUUCUCUAAAAUUUUCUCAAAAU   1
  *|||=|||||||||||=||||||
targets:2518   CAAGGGAUUUUAAAAGGGUUUUA   2540

2.5 Arabidopsis thaliana fatty acid reductase 5 (FAR5), mRNA fatty acid reductase 5(FAR5) coding protein psRNATarget