ncRNA ID | novel_ath_miR691 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr2:14683075-14683284 [+] |
Reference genome | TAIR10 |
Source | SRR3954849 |
Length | 23 |
Mature sequence(if miRNA) | 188 - UAAAACUCUUUUAAAAUCUCUUA - 210 |
Stem-loop(if miRNA) |
--                     C  U         GA        -                    A  AUUUGUAAA      U         A     G     AAA   AGAGAUUUUAAAAGGGUUUUA AA AUUUAUAAG  AUUUUAAA GGAUUUUAAAAGAUUUACAA GA         GAUUUU AAAGGGUUU AAAGU UUUUG   G   ||||||||||||||||||||| || |||||||||  |||||||| |||||||||||||||||||| ||         |||||| ||||||||| ||||| |||||   A   UCUCUAAAAUUUUCUCAAAAU UU UAAAUGUUC  UAAAAUUU CCUAAAAUUUUUUAAAUGUU CU         CUAAAA UUUCCCAAA UUUUA GGAAC   U AU                     U  C         UC        U                    -  ---------      U         A     G     AUU |
Stem-loop sequence | AGAGAUUUUAAAAGGGUUUUACAAUAUUUAUAAGGAAUUUUAAAGGAUUUUAAAAGAUUUACAAAGAAUUUGUAAAGAUUUUUAAAGGGUUUAAAAGUGUUUUGAAAGAUUUACAAGGGAUUUUAAAACCCUUUUAAAAUCUCUUGUAAAUUUUUUAAAAUCCUUUUAAAAUCUCUUGUAAAUCUUUUAAAACUCUUUUAAAAUCUCUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_114323.4 |
|
2.5 | Arabidopsis thaliana fatty acid reductase 5 (FAR5), mRNA | fatty acid reductase 5(FAR5) | coding protein | psRNATarget | |||||||||
NM_114323.4 |
|
2.5 | Arabidopsis thaliana fatty acid reductase 5 (FAR5), mRNA | fatty acid reductase 5(FAR5) | coding protein | psRNATarget |