ncRNA ID | novel_ath_miR689 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr5:11384525-11384632 [+] |
Reference genome | TAIR10 |
Source | SRR3707800 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UUUGAAAAAAACUUUUGGCGGG - 22 |
Stem-loop(if miRNA) |
--  UG   A   C    G  G    AUU       - G        UGG      U   UU  AAA AAA UUUU GC GGAA   UGUUUUU C AAAAGAUU   CGAGAA U   ||  ||| ||| |||| || ||||   ||||||| | ||||||||   ||||||   AG  UUU UUU AAGG CG UUUU   ACAAGGG G UUUUUUAA   GCUUUU U UA  GU   A   A    G  G    ---       C G        --A      U |
Stem-loop sequence | UUUGAAAAAAACUUUUGGCGGGAAAUUUGUUUUUCGAAAAGAUUUGGCGAGAAUUUUUUUUCGAAAUUUUUUGGCGGGAACAUUUUGGCGGGAAAUUUAUUUUGGAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BX832756.1 |
|
2.5 | Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH9ZA07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) | NA | coding protein | psRNATarget |