ncRNA ID | novel_ath_miR688 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr3:14810723-14810785 [-] |
Reference genome | TAIR10 |
Source | SRR3707800;ERR1297303;ERR1297304;SRR1266859 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUUGUUGAUCUUUGUUUUGUGACA - 24 |
Stem-loop(if miRNA) |
--  UU            A     A C        UC  UAAAGCGGAGAU AAUAA G AAAUAA   ||  |||||||||||| ||||| | |||||A   AG  GUUUUGUUUCUA UUGUU C UUUAUU AC  -U            G     A -      |
Stem-loop sequence | UCUUUAAAGCGGAGAUAAAUAAAGCAAAUAAAUUAUUUCAUUGUUGAUCUUUGUUUUGUGACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_117921.1 |
|
3.0 | Arabidopsis thaliana RING/U-box superfamily protein partial mRNA | RING/U-box superfamily protein(AT4G18110) | coding protein | psRNATarget |