ncRNA ID | novel_ath_miR686 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr2:2771318-2771392 [+] |
Reference genome | TAIR10 |
Source | SRR3707799 |
Length | 23 |
Mature sequence(if miRNA) | 1 - CGACUGAGCUCGGUGAGCUGAUC - 23 |
Stem-loop(if miRNA) |
-- G   G      -   --          GU   G    A   C ACU AGCUCG GUG  AGCUGAUCGA  ACU ACCC G   | ||| |||||| |||  ||||||||||  ||| ||||   G UGG UCGAGC CAC  UCGACUGGCU  UGG UGGG U CA G   -      U   AG          --   -    U |
Stem-loop sequence | CGACUGAGCUCGGUGAGCUGAUCGAGUACUGACCCAGUUGGGUGGUUCGGUCAGCUGACACUCGAGCUGGUGGAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_116946.1 |
|
0.0 | Arabidopsis thaliana hypothetical protein partial mRNA | hypothetical protein(AT4G08760) | coding protein | psRNATarget |