ncRNA ID | novel_ath_miR677 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr1:24443485-24443637 [+] |
Reference genome | TAIR10 |
Source | SRR3707798 |
Length | 18 |
Mature sequence(if miRNA) | 136 - AUUUUUCUGGAUACUUAC - 153 |
Stem-loop(if miRNA) |
--    UGA       C      C  GA     GUAUUUA      AGUCAAUG   -- UUUAGCAUAUGAUUAGUUGAUU   AAGU   UAGAGAA AUGACG GU  GAUUC       GGUCUA        AUG  U                      A   ||||   ||||||| |||||| ||  |||||       ||||||        |||  |                      C   UUCA   GUCUUUU UAUUGU CG  UUAAG       UCAGAU        AUU  U                      G CA    UAG       -      -  -A     ------A      -GAUAUUU   UU CAACUUCGAGGAUUAAUUCACG |
Stem-loop sequence | AAGUUGAUAGAGAACAUGACGCGUGAGAUUCGUAUUUAGGUCUAAGUCAAUGAUGUUUUAGCAUAUGAUUAGUUGAUUACGGCACUUAAUUAGGAGCUUCAACUUUUUAUUUAUAGUAGACUAGAAUUAGCUGUUAUUUUUCUGGAUACUUAC |