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BaseInfo

ncRNA ID novel_ath_miR677
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:24443485-24443637 [+]
Reference genome TAIR10
Source SRR3707798
Length 18
Mature sequence(if miRNA) 136 - AUUUUUCUGGAUACUUAC - 153
Stem-loop(if miRNA) --    UGA       C      C  GA     GUAUUUA      AGUCAAUG   -- UUUAGCAUAUGAUUAGUUGAUU
  AAGU   UAGAGAA AUGACG GU  GAUUC       GGUCUA        AUG  U                      A
  ||||   ||||||| |||||| ||  |||||       ||||||        |||  |                      C
  UUCA   GUCUUUU UAUUGU CG  UUAAG       UCAGAU        AUU  U                      G
CA    UAG       -      -  -A     ------A      -GAUAUUU   UU CAACUUCGAGGAUUAAUUCACG
Stem-loop sequence AAGUUGAUAGAGAACAUGACGCGUGAGAUUCGUAUUUAGGUCUAAGUCAAUGAUGUUUUAGCAUAUGAUUAGUUGAUUACGGCACUUAAUUAGGAGCUUCAACUUUUUAUUUAUAGUAGACUAGAAUUAGCUGUUAUUUUUCUGGAUACUUAC