Search result

BaseInfo

ncRNA ID novel_ath_miR663
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:10587966-10588103 [+]
Reference genome TAIR10
Source SRR3707797
Length 21
Mature sequence(if miRNA) 1 - GUAAGUUUGUUGACUCGUCCA - 21
Stem-loop(if miRNA) --         -UU     G CCAA      A       ---G       ---AUA   AGAACU     U    A
  GUAAGUUUG   GACUC U    GAUCGG AGAAUCU    GAUUUUG      CCU      GAAAC UUAU A
  |||||||||   ||||| |    |||||| |||||||    |||||||      |||      ||||| |||| U
  CGUUUAGAU   UUGAG A    CUAGUU UCUUAGA    UUAGAAC      GGA      UUUUG AAUG G
AA         UGA     G ----      G       AAGU       AAACAA   ----GU     U    C
Stem-loop sequence GUAAGUUUGUUGACUCGUCCAAGAUCGGAAGAAUCUGGAUUUUGAUACCUAGAACUGAAACUUUAUAAUGCGUAAUGUUUUUGAGGAACAAACAAGAUUUGAAAGAUUCUGUUGAUCAGGAGUUAGUUAGAUUUGCAA