Search result

BaseInfo

ncRNA ID ath-miRf10502-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - CCGUGAACGGCGUCAGUGCCAU - NA
Stem-loop(if miRNA)      C      C                 AACAA  U
AUCUA GGCACU ACGCCGUUCACGGCAAC     CG C
||||| |||||| |||||||||||||||||     ||
UAGGU CCGUGA UGCGGCAAGUGCCGUUG     GC U
     A      C                 --ACG  A
Stem-loop sequence AUCUACGGCACUCACGCCGUUCACGGCAACAACAACGUCUACGGCAGUUGCCGUGAACGGCGUCAGUGCCAUGGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001339300.1
ncRNA:22   UACCGUGACUGCGGCAAGUGCC   1
  |*||||||||||||||||||||
targets:306   ACGGCACUGACGCCGUUCACGG   327

0.0 Arabidopsis thaliana Glycosyl hydrolase family protein mRNA Glycosyl hydrolase family protein(AT3G47010) coding protein psRNATarget
BX823971.1
ncRNA:22   UACCGUGACUGCGGCAAGUGCC   1
  |*||||||||||||||||||||
targets:126   ACGGCACUGACGCCGUUCACGG   147

0.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH11ZD09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
BT022037.1
ncRNA:22   UACCGUGACUGCGGCAAGUGCC   1
  |*||||||||||||||||||||
targets:219   ACGGCACUGACGCCGUUCACGG   240

0.0 Arabidopsis thaliana At3g47010 gene, complete cds NA coding protein psRNATarget
AK228844.1
ncRNA:22   UACCGUGACUGCGGCAAGUGCC   1
  |*||||||||||||||||||||
targets:241   ACGGCACUGACGCCGUUCACGG   262

0.0 Arabidopsis thaliana mRNA for beta-D-glucan exohydrolase - like protein, complete cds, clone: RAFL16-17-D15 NA coding protein psRNATarget
NM_001203094.1
ncRNA:22   UACCGUGACUGCGGCAAGUGCC   1
  |*||||||||||||||||||||
targets:306   ACGGCACUGACGCCGUUCACGG   327

0.0 Arabidopsis thaliana Glycosyl hydrolase family protein mRNA Glycosyl hydrolase family protein(AT3G47010) coding protein psRNATarget
NM_114568.6
ncRNA:22   UACCGUGACUGCGGCAAGUGCC   1
  |*||||||||||||||||||||
targets:306   ACGGCACUGACGCCGUUCACGG   327

0.0 Arabidopsis thaliana Glycosyl hydrolase family protein mRNA Glycosyl hydrolase family protein(AT3G47010) coding protein psRNATarget
AK229326.1
ncRNA:22   UACCGUGACUGCGGCAAGUGCC   1
  ||||||=|||=|||||||||||
targets:402   AUGGCAUUGAUGCCGUUCACGG   423

2.5 Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-58-F12 NA coding protein psRNATarget
AK118082.1
ncRNA:22   UACCGUGACUGCGGCAAGUGCC   1
  ||||||=|||=|||||||||||
targets:484   AUGGCAUUGAUGCCGUUCACGG   505

2.5 Arabidopsis thaliana At5g04885 mRNA for unknown protein, complete cds, clone: RAFL19-33-I17 NA coding protein psRNATarget
NM_001342795.1
ncRNA:22   UACCGUGACUGCGGCAAGUGCC   1
  ||||||=|||=|||||||||||
targets:533   AUGGCAUUGAUGCCGUUCACGG   554

2.5 Arabidopsis thaliana Glycosyl hydrolase family protein mRNA Glycosyl hydrolase family protein(AT5G04885) coding protein psRNATarget
NM_147836.5
ncRNA:22   UACCGUGACUGCGGCAAGUGCC   1
  ||||||=|||=|||||||||||
targets:663   AUGGCAUUGAUGCCGUUCACGG   684

2.5 Arabidopsis thaliana Glycosyl hydrolase family protein mRNA Glycosyl hydrolase family protein(AT5G04885) coding protein psRNATarget
NM_001342796.1
ncRNA:22   UACCGUGACUGCGGCAAGUGCC   1
  ||||||=|||=|||||||||||
targets:781   AUGGCAUUGAUGCCGUUCACGG   802

2.5 Arabidopsis thaliana Glycosyl hydrolase family protein mRNA Glycosyl hydrolase family protein(AT5G04885) coding protein psRNATarget
NM_114571.1
ncRNA:22   UACCGUGACUGCGGCAAGUGCC   1
  ||||||=|||||||||*|||||
targets:290   AUGGCAUUGACGCCGUCCACGG   311

2.5 Arabidopsis thaliana Glycosyl hydrolase family protein partial mRNA Glycosyl hydrolase family protein(AT3G47040) coding protein psRNATarget
NM_001339302.1
ncRNA:22   UACCGUGACUGCGGCAAGUGCC   1
  ||||||=|||||||||*|||||
targets:337   AUGGCAUUGACGCCGUCCACGG   358

2.5 Arabidopsis thaliana Glycosyl hydrolase family protein mRNA Glycosyl hydrolase family protein(AT3G47040) coding protein psRNATarget
NM_001203095.1
ncRNA:22   UACCGUGACUGCGGCAAGUGCC   1
  ||||||=|||||||||*|||||
targets:337   AUGGCAUUGACGCCGUCCACGG   358

2.5 Arabidopsis thaliana Glycosyl hydrolase family protein mRNA Glycosyl hydrolase family protein(AT3G47040) coding protein psRNATarget
NM_001339301.1
ncRNA:22   UACCGUGACUGCGGCAAGUGCC   1
  ||||||=|||||||||*|||||
targets:337   AUGGCAUUGACGCCGUCCACGG   358

2.5 Arabidopsis thaliana Glycosyl hydrolase family protein mRNA Glycosyl hydrolase family protein(AT3G47040) coding protein psRNATarget