ncRNA ID | novel_ath_miR654 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr1:9236388-9236506 [-] |
Reference genome | TAIR10 |
Source | ERR1337935 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCUCUUGUAAAUCUUGUAAAACA - 24 |
Stem-loop(if miRNA) |
--     A     G       AU         AU      -             AAAUCC   UUUUA AAGAU UACAAGG  UUUUAAAAG  UUUUAA AGAAUUUACAAGA      U   ||||| ||||| |||||||  |||||||||  |||||| |||||||||||||      U   AAAAU UUCUA AUGUUCU  AAAAUUUUC  AAAAUU UUUUAAAUGUUCU      U AC     G     A       CU         -C      A             CAAAAA |
Stem-loop sequence | UUUUAAAAGAUGUACAAGGAUUUUUAAAAGAUUUUUAAAGAAUUUACAAGAAAAUCCUUUAAAAACUCUUGUAAAUUUUAUUAAAACCUUUUAAAAUCUCUUGUAAAUCUUGUAAAACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_114323.4 |
|
2.5 | Arabidopsis thaliana fatty acid reductase 5 (FAR5), mRNA | fatty acid reductase 5(FAR5) | coding protein | psRNATarget |