Search result

BaseInfo

ncRNA ID novel_ath_miR654
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:9236388-9236506 [-]
Reference genome TAIR10
Source ERR1337935
Length 24
Mature sequence(if miRNA) 1 - AUCUCUUGUAAAUCUUGUAAAACA - 24
Stem-loop(if miRNA) --     A     G       AU         AU      -             AAAUCC
  UUUUA AAGAU UACAAGG  UUUUAAAAG  UUUUAA AGAAUUUACAAGA      U
  ||||| ||||| |||||||  |||||||||  |||||| |||||||||||||      U
  AAAAU UUCUA AUGUUCU  AAAAUUUUC  AAAAUU UUUUAAAUGUUCU      U
AC     G     A       CU         -C      A             CAAAAA
Stem-loop sequence UUUUAAAAGAUGUACAAGGAUUUUUAAAAGAUUUUUAAAGAAUUUACAAGAAAAUCCUUUAAAAACUCUUGUAAAUUUUAUUAAAACCUUUUAAAAUCUCUUGUAAAUCUUGUAAAACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_114323.4
ncRNA:24   ACAAAAUGUUCUAAAUGUUCUCUA   1
  *||||||*||||||||||||=|||
targets:2502   GGUUUUAAAAGAUUUACAAGGGAU   2525

2.5 Arabidopsis thaliana fatty acid reductase 5 (FAR5), mRNA fatty acid reductase 5(FAR5) coding protein psRNATarget