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BaseInfo

ncRNA ID novel_ath_miR647
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:19326388-19326439 [-]
Reference genome TAIR10
Source SRR3707795
Length 19
Mature sequence(if miRNA) 34 - GUGAUUGUGUGUUAUAUAG - 52
Stem-loop(if miRNA) --   A   U  G   U  A G    U
  GUG UUG GU UUA AU G GAGU C
  ||| ||| || ||| || | ||||
  CGC GAC CA AGU UG U CUCA U
UG   -   -  G   U  A G    U
Stem-loop sequence GUGAUUGUGUGUUAUAUAGGGAGUUCUUACUCGUAGUUUGAGACCAGCGCGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_104270.3
ncRNA:19   GAUAUAUUGUGUGU-UAGUG   1
  ||||||||||||||-|||||
targets:146   CUAUAUAACACACACAUCAC   165

3.0 Arabidopsis thaliana GDSL-motif lipase 5 (GLIP5), mRNA GDSL-motif lipase 5(GLIP5) coding protein psRNATarget