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BaseInfo

ncRNA ID	novel_ath_miR646
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr3:17560574-17560621 [+]
Reference genome	TAIR10
Source	SRR3707795
Length	22
Mature sequence(if miRNA)	1 - UUUUUUAUUUUCUGUAGUAAUU - 22
Stem-loop(if miRNA)	--      A    -  G      UU   UUUUUU UUUU CU UAGUAA  U   |||||| |||| || ||||||   AAAAAA AAAA GA AUCGUU  U AA      A    U  -      UU
Stem-loop sequence	UUUUUUAUUUUCUGUAGUAAUUUUUUUUGCUAAGUAAAAAAAAAAAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001345002.1	ncRNA:22   UUAAUGAUGUCUUUUAUUUUUU   1   |=|||||=*||||||||||||| targets:212   AGUUACUGGAGAAAAUAAAAAA   233 Target Full Sequence	2.0	Arabidopsis thaliana hypothetical protein mRNA	hypothetical protein(AT5G52655)	coding protein	psRNATarget
NM_127587.3	ncRNA:22   UU-AAUGAUGUCUUUUAUUUUUU   1   ||-||||||*||||||||||||* targets:1660   AACUUACUAGAGAAAAUAAAAAC   1682 Target Full Sequence	2.0	Arabidopsis thaliana Zinc finger C-x8-C-x5-C-x3-H type family protein mRNA	Zinc finger C-x8-C-x5-C-x3-H type family protein(AT2G20280)	coding protein	psRNATarget
NM_120159.3	ncRNA:22   UUAAUGAUGUCUUUUAUUUUUU   1   *=|||||=|||||||*|||||| targets:1243   UGUUACUGCAGAAAAAAAAAAA   1264 Target Full Sequence	2.5	Arabidopsis thaliana alpha/beta-Hydrolases superfamily protein mRNA	alpha/beta-Hydrolases superfamily protein(AT4G39955)	coding protein	psRNATarget
AY084642.1	ncRNA:22   UUAAUGAUGUCUUUUAUUUUUU   1   *=|||||=|||||||*|||||| targets:1018   UGUUACUGCAGAAAAAAAAAAA   1039 Target Full Sequence	2.5	Arabidopsis thaliana clone 114014 mRNA, complete sequence	NA	coding protein	psRNATarget