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BaseInfo

ncRNA ID novel_ath_miR638
Species Arabidopsis thaliana
Class miRNA
Genome position Chr2:3433556-3433632 [-]
Reference genome TAIR10
Source SRR3707794
Length 24
Mature sequence(if miRNA) 54 - AGAUAGAGAACUCGCGGAGUGGGG - 77
Stem-loop(if miRNA) --       --   CU         GGGGU     UU    U
  AGAUAGA  GAA  CGCGGAGUG     UCCUA  AGCU C
  |||||||  |||  |||||||||     |||||  ||||
  UCUGUCU  CUU  GCGCCUCAU     AGGAU  UCGA G
GA       UA   UC         -----     UU    C
Stem-loop sequence AGAUAGAGAACUCGCGGAGUGGGGGUUCCUAUUAGCUUCGCAGCUUUUAGGAUACUCCGCGCUUUCAUUCUGUCUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK230216.1
ncRNA:24   GGGGUGAGGCGCUCAAGAGAUAGA   1
  ||||||||||||||||||||||||
targets:1465   CCCCACUCCGCGAGUUCUCUAUCU   1488

0.0 Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-99-F16 NA coding protein psRNATarget