ncRNA ID | novel_ath_miR638 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr2:3433556-3433632 [-] |
Reference genome | TAIR10 |
Source | SRR3707794 |
Length | 24 |
Mature sequence(if miRNA) | 54 - AGAUAGAGAACUCGCGGAGUGGGG - 77 |
Stem-loop(if miRNA) |
--       --   CU         GGGGU     UU    U   AGAUAGA  GAA  CGCGGAGUG     UCCUA  AGCU C   |||||||  |||  |||||||||     |||||  ||||   UCUGUCU  CUU  GCGCCUCAU     AGGAU  UCGA G GA       UA   UC         -----     UU    C |
Stem-loop sequence | AGAUAGAGAACUCGCGGAGUGGGGGUUCCUAUUAGCUUCGCAGCUUUUAGGAUACUCCGCGCUUUCAUUCUGUCUAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK230216.1 |
|
0.0 | Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-99-F16 | NA | coding protein | psRNATarget |