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BaseInfo

ncRNA ID novel_ath_miR610
Species Arabidopsis thaliana
Class miRNA
Genome position Chr3:5786358-5786466 [-]
Reference genome TAIR10
Source SRR3707790
Length 23
Mature sequence(if miRNA) 87 - UUAUUGUAUGUUUGUUUGAUGUG - 109
Stem-loop(if miRNA) --     G        --      G   AC   UU     -   UCUUCUCU     C
  UUAUU UAUGUUUG  UUUGAU UGA  GAU  UGGAU GAU        UUUUA U
  ||||| ||||||||  |||||| |||  |||  ||||| |||        |||||
  AGUGA GUGCAGAC  AGACUA ACU  UUA  ACCUG CUG        AAAAU A
AC     A        UU      -   -A   UU     U   --UUCACU     G
Stem-loop sequence UUAUUGUAUGUUUGUUUGAUGUGAACGAUUUUGGAUGAUUCUUCUCUUUUUACUAGUAAAAUCACUUGUCUGUCCAUUAUUAUCAAUCAGAUUCAGACGUGAAGUGACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_128810.2
ncRNA:23   GUGUAGUUUGUUUGUAUGUUAUU   1
  *|*|||||||||||||||||*||
targets:97   AAAAUCAAACAAACAUACAAAAA   119

1.5 Arabidopsis thaliana mitogen-activated protein kinase kinase kinase 17 (MAPKKK17), mRNA mitogen-activated protein kinase kinase kinase 17(MAPKKK17) coding protein psRNATarget