ncRNA ID | novel_ath_miR610 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr3:5786358-5786466 [-] |
Reference genome | TAIR10 |
Source | SRR3707790 |
Length | 23 |
Mature sequence(if miRNA) | 87 - UUAUUGUAUGUUUGUUUGAUGUG - 109 |
Stem-loop(if miRNA) |
--     G        --      G   AC   UU     -   UCUUCUCU     C   UUAUU UAUGUUUG  UUUGAU UGA  GAU  UGGAU GAU        UUUUA U   ||||| ||||||||  |||||| |||  |||  ||||| |||        |||||   AGUGA GUGCAGAC  AGACUA ACU  UUA  ACCUG CUG        AAAAU A AC     A        UU      -   -A   UU     U   --UUCACU     G |
Stem-loop sequence | UUAUUGUAUGUUUGUUUGAUGUGAACGAUUUUGGAUGAUUCUUCUCUUUUUACUAGUAAAAUCACUUGUCUGUCCAUUAUUAUCAAUCAGAUUCAGACGUGAAGUGACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_128810.2 |
|
1.5 | Arabidopsis thaliana mitogen-activated protein kinase kinase kinase 17 (MAPKKK17), mRNA | mitogen-activated protein kinase kinase kinase 17(MAPKKK17) | coding protein | psRNATarget |