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BaseInfo

ncRNA ID novel_ath_miR604
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:15526100-15526238 [+]
Reference genome TAIR10
Source SRR3707789
Length 24
Mature sequence(if miRNA) 1 - AUUGAAACGCUUGGAAACUGAAGC - 24
Stem-loop(if miRNA) --  UG    --G U      C      UU  UGUUCUUGUAA     C       -U    UCUU    UG UUU  U
  AU  AAAC   C UGGAAA UGAAGC  GU           UCACA GACAGGU  AGUC    CAGU  C   GG U
  ||  ||||   | |||||| ||||||  ||           ||||| |||||||  ||||    ||||  |   ||
  UG  UUUG   G GCCUUU ACUUCG  UA           AGUGU CUGUUUA  UUAG    GUUA  G   UC G
CU  GU    UCA C      U      UU  -----------     -       CC    ---U    GU -UU  U
Stem-loop sequence AUUGAAACGCUUGGAAACUGAAGCUUGUUGUUCUUGUAAUCACACGACAGGUUAGUCUCUUCAGUUGCUUUGGUUGUCUUUGUGAUUGUGAUUCCAUUUGUCUGUGAAUUUGCUUCAUUUUCCGCGACUGUUUUGGUUC