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BaseInfo

ncRNA ID	novel_ath_miR602
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr2:6010220-6010405 [-]
Reference genome	TAIR10
Source	SRR3707788
Length	24
Mature sequence(if miRNA)	163 - AAAGAUCUUGUAGGCUAUAGUGAU - 186
Stem-loop(if miRNA)	--A         U             A  AGCCAUA    GGAUGA G      GG AA   ACA    GGCAACU     ACC     G  U  CU    AAGAUCUUG AGGCUAUAGUGAU GC       ACGU      A AUGACG  A  AGC   ACUG       CUUUU   UGCAU AA GU  G    ||||||||| ||||||||||||| ||       ||||      | ||||||  |  |||   ||||       |||||   ||||| || ||    UUCUAGAAC UUCGGUAUCACUA CG       UGCG      U UGCUGC  U  UCG   UGGC       GAAAA   ACGUG UU CA  A UUC         -             A  AAACAUA    ---AAG G      UU -C   --A    AUAUAAC     CAC     G  -  UU
Stem-loop sequence	AAAGAUCUUGUAGGCUAUAGUGAUAGCAGCCAUAACGUGGAUGAAGAUGACGGGAAAAGCACAACUGGGCAACUCUUUUACCUGCAUGAAUGUCUGAUUACUUGGUGCACACAAAAGCAAUAUACGGUAGCUCUUUCGUCGUGUGAAGCGUAUACAAAGCAAUCACUAUGGCUUCAAGAUCUUCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001343778.1	ncRNA:24   UAG--UGAUAUCGGAUGUUCUAGAAA   1   ||=--|=|||*|*||||||||||||| targets:1565   AUUUGAUUAUUGGCUACAAGAUCUUU   1590 Target Full Sequence	2.0	Arabidopsis thaliana Serine carboxypeptidase S28 family protein mRNA	Serine carboxypeptidase S28 family protein(AT5G22860)	coding protein	psRNATarget
NM_001343776.1	ncRNA:24   UAG--UGAUAUCGGAUGUUCUAGAAA   1   ||=--|=|||*|*||||||||||||| targets:1589   AUUUGAUUAUUGGCUACAAGAUCUUU   1614 Target Full Sequence	2.0	Arabidopsis thaliana Serine carboxypeptidase S28 family protein mRNA	Serine carboxypeptidase S28 family protein(AT5G22860)	coding protein	psRNATarget
NM_001343777.1	ncRNA:24   UAG--UGAUAUCGGAUGUUCUAGAAA   1   ||=--|=|||*|*||||||||||||| targets:1565   AUUUGAUUAUUGGCUACAAGAUCUUU   1590 Target Full Sequence	2.0	Arabidopsis thaliana Serine carboxypeptidase S28 family protein mRNA	Serine carboxypeptidase S28 family protein(AT5G22860)	coding protein	psRNATarget
BX825953.1	ncRNA:24   UAGU----GAUAUCGGAUGUUCUAGAAA   1   *||=----||=||||||||=|||||||| targets:241   CUCGGCGUCUGUAGCCUACGAGAUCUUU   268 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL75ZF07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget