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BaseInfo

ncRNA ID novel_ath_miR597
Species Arabidopsis thaliana
Class miRNA
Genome position Chr5:22455120-22455163 [+]
Reference genome TAIR10
Source ERR1337931
Length 21
Mature sequence(if miRNA) 1 - UUUGGUCUGCGAUGGCACUGC - 21
Stem-loop(if miRNA) --U UG   -    AUG     G
   U  GUC UGCG   GCACU C
   |  ||| ||||   |||||
   G  CAG GUGC   CGUGA A
CUU GU   U    -AA     A
Stem-loop sequence UUUGGUCUGCGAUGGCACUGCAAAGUGCAACGUGUGACUGGUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001343616.1
ncRNA:20   GUCACGGUAGCGUCUGGUUU   1
  **|||*|||||||||||||*
targets:1   AUGUGGCAUCGCAGACCAAU   20

3.0 Arabidopsis thaliana hypothetical protein partial mRNA hypothetical protein(AT5G19595) coding protein psRNATarget