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BaseInfo

ncRNA ID novel_ath_miR595
Species Arabidopsis thaliana
Class miRNA
Genome position Chr3:13584572-13584654 [+]
Reference genome TAIR10
Source SRR3707788
Length 19
Mature sequence(if miRNA) 65 - AGUUGUCUGAUGCGUAGUC - 83
Stem-loop(if miRNA) -UUGU     -AU   -    G   U    --U     A   U
     CGCAU   GCA UUGG GAU AUGA   GAGAU GCU U
     |||||   ||| |||| ||| ||||   ||||| ||| G
     GCGUA   UGU GAUC UUG UACU   UUUUA CGA U
CUGAU     GUC   U    G   U    UGG     -   A
Stem-loop sequence UUGUCGCAUAUGCAUUGGGGAUUAUGAUGAGAUAGCUUUGUAAGCAUUUUGGUUCAUUGUUGCUAGUUGUCUGAUGCGUAGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK230139.1
ncRNA:19   CUGAUGCGUAGUCUGUUGA   1
  |||*||||||||*||||||
targets:870   GACAACGCAUCAAACAACU   888

2.5 Arabidopsis thaliana mRNA for hypothetical protein, clone: RAFL22-82-O04 NA coding protein psRNATarget