ncRNA ID | novel_ath_miR589 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr4:3344492-3344694 [+] |
Reference genome | TAIR10 |
Source | ERR1337931 |
Length | 24 |
Mature sequence(if miRNA) | 180 - UUUUAAAACUCUUGUAAAUCUUUU - 203 |
Stem-loop(if miRNA) |
---         U           AGA    AA   GA   GCAAGG                    --AG   ACAAGAGAUUUAAAAUGGUUGAAAAUUUAU    AGAUUUACA GAGUUUUGAAA   UUUU  AAA  UUU      GUUUUAAAAACCUUUGUAAG    UUC                              U    ||||||||| |||||||||||   ||||  |||  |||      ||||||||||||||||||||    |||    UCUAAAUGU CUCAAAAUUUU   AGAA  UUU  AAA      CAAAAUUUUUGGGAACAUUU    AAU                              A UUU         U           --G    CA   AC   AUUUUA                    GGUA   UUUUAUAAAAUUUUUGGGAACAUUUGGGAA |
Stem-loop sequence | AGAUUUACAUGAGUUUUGAAAAGAUUUUAAAAAGAUUUGCAAGGGUUUUAAAAACCUUUGUAAGAGUUCACAAGAGAUUUAAAAUGGUUGAAAAUUUAUUAAAGGGUUUACAAGGGUUUUUAAAAUAUUUUUAAAUGGUUUACAAGGGUUUUUAAAACAUUUUAAAACAUUUACAAGAGUUUUAAAACUCUUGUAAAUCUUUU |