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BaseInfo

ncRNA ID novel_ath_miR584
Species Arabidopsis thaliana
Class miRNA
Genome position Chr5:11746401-11746479 [+]
Reference genome TAIR10
Source SRR3707787
Length 22
Mature sequence(if miRNA) 1 - CUCGACUGAGCUCGGUGAGCUG - 22
Stem-loop(if miRNA) --C  G   G      -   --        AA U    A   A
   UC ACU AGCUCG GUG  AGCUGAUC  G ACUA CCC G
   || ||| |||||| |||  ||||||||  | |||| |||
   AG UGG UCGAGC CAC  UCGACUGG  C UGGU GGG C
GUC  G   -      U   AG        -C -    -   U
Stem-loop sequence CUCGACUGAGCUCGGUGAGCUGAUCAAGUACUAACCCAGCUGGGUGGUCCGGUCAGCUGACACUCGAGCUGGUGGACUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_116946.1
ncRNA:22   GUCGAGUGGCUCGAGUCAGCUC   1
  =|||||||||||||||||||||
targets:1521   UAGCUCACCGAGCUCAGUCGAG   1542

0.0 Arabidopsis thaliana hypothetical protein partial mRNA hypothetical protein(AT4G08760) coding protein psRNATarget