ncRNA ID | novel_ath_miR579 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr2:5337516-5337672 [+] |
Reference genome | TAIR10 |
Source | SRR3707786 |
Length | 24 |
Mature sequence(if miRNA) | 134 - AGGGUUGUGUUAGGAUUGUUAGUC - 157 |
Stem-loop(if miRNA) |
--G       A     -   U     UUU UG  -    G   AGA     UG   UC     A   U   A  -GAAG   GG    UGAUAAU CUUAA GCA CUCUU   U  GU CCAG UAA   UAAAG  UGA  GUAGA UCA GGC AG     AGA  A    ||||||| ||||| ||| |||||   |  || |||| |||   |||||  |||  ||||| ||| ||| ||     |||    AUUGUUA GGAUU UGU GGGAA   G  CA GGUU AUU   GUUUU  GUU  UAUUU AGU UUG UC     UCU  U CUG       -     G   U     --U GU  A    -   --G     GU   UU     -   -   C  AAGGA   AG |
Stem-loop sequence | GUGAUAAUACUUAAGCAUCUCUUUUUUUGGUCCAGGUAAAGAUAAAGUGUGAUCGUAGAAUCAUGGCAAGGAAGAGAGGAUGAUCUAGGAACUCGUUUGAUUUAUUUUUGUGUUUUGGUUAUUGGAACUGGUAAGGGUUGUGUUAGGAUUGUUAGUC |