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BaseInfo

ncRNA ID novel_ath_miR573
Species Arabidopsis thaliana
Class miRNA
Genome position Chr2:2629039-2629143 [+]
Reference genome TAIR10
Source SRR3707785
Length 23
Mature sequence(if miRNA) 1 - AAUUUUUAUUUGGACGUUUAAUA - 23
Stem-loop(if miRNA) --                           ---A        -    U   GGUU
  AAUUUUUAUUUGGACGUUUAAUACCUA    UAUUAGUU GUGU UUU    G
  |||||||||||||||||||||||||||    |||||||| |||| |||    G
  UUAAAAAUAAACCUGCAAAUUAUGGAU    AUAAUCAA CAUA AAA    A
GA                           CAAC        A    U   AAGA
Stem-loop sequence AAUUUUUAUUUGGACGUUUAAUACCUAAUAUUAGUUGUGUUUUUGGUUGGAAGAAAAAUAUACAAACUAAUACAACUAGGUAUUAAACGUCCAAAUAAAAAUUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_123283.5
ncRNA:23   AUAAUUUGCAGGUUUAUUUUUAA   1
  *|*||||=*|||||||||||||*
targets:849   CACUAAAUAUCCAAAUAAAAAUA   871

3.0 Arabidopsis thaliana chlororespiratory reduction 7 (CRR7), mRNA chlororespiratory reduction 7(CRR7) coding protein psRNATarget