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BaseInfo

ncRNA ID ath-miRf10493-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - GCGAUGGUGUCGAUCGACACUG - NA
Stem-loop(if miRNA)   UG                  -A       U    -  --AUU   - - G UUAAUGUCCAGCC
GG  GUGUCGGUCGACACUAUC  AUGUGUG CGAG CG     CUG G A A             U
||  ||||||||||||||||||  ||||||| |||| ||     ||| | | |
CC  CACAGCUAGCUGUGGUAG  UAUAUAU GCUC GU     GAC C G C             G
  GU                  CG       -    U  AGUCC   A U - UUCAUCUUAGCUG
Stem-loop sequence GGUGGUGUCGGUCGACACUAUCAAUGUGUGUCGAGCGAUUCUGGAGAUUAAUGUCCAGCCUGGUCGAUUCUACUUCGUCACAGCCUGAUGUCUCGUAUAUAUGCGAUGGUGUCGAUCGACACUGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
DQ069810.1
ncRNA:22   GUCACAGCUAGCUGUGGUAGCG   1
  ==||||||||||||||||||||
targets:210   UGGUGUCGAUCGACACCAUCGC   231

0.0 Arabidopsis thaliana At2g13270 mRNA, partial sequence NA coding protein psRNATarget
EF183309.1
ncRNA:22   GUCACAGCUAGCUGUGGUAGCG   1
  *|||||||||||||||||||*=
targets:1333   GAGUGUCGAUCGACACCAUCAU   1354

2.5 Arabidopsis thaliana clone asmbl_5245 unknown mRNA sequence NA coding protein psRNATarget
EF183308.1
ncRNA:22   GUCACAGCUAGCUGUGGUAGCG   1
  *|||||||||||||||||||*=
targets:1241   GAGUGUCGAUCGACACCAUCAU   1262

2.5 Arabidopsis thaliana clone asmbl_5244 unknown mRNA sequence NA coding protein psRNATarget