ncRNA ID | ath-miRf10493-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 22 |
Mature sequence(if miRNA) | NA - GCGAUGGUGUCGAUCGACACUG - NA |
Stem-loop(if miRNA) |
  UG                  -A       U    -  --AUU   - - G UUAAUGUCCAGCC GG  GUGUCGGUCGACACUAUC  AUGUGUG CGAG CG     CUG G A A             U ||  ||||||||||||||||||  ||||||| |||| ||     ||| | | | CC  CACAGCUAGCUGUGGUAG  UAUAUAU GCUC GU     GAC C G C             G   GU                  CG       -    U  AGUCC   A U - UUCAUCUUAGCUG |
Stem-loop sequence | GGUGGUGUCGGUCGACACUAUCAAUGUGUGUCGAGCGAUUCUGGAGAUUAAUGUCCAGCCUGGUCGAUUCUACUUCGUCACAGCCUGAUGUCUCGUAUAUAUGCGAUGGUGUCGAUCGACACUGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
DQ069810.1 |
|
0.0 | Arabidopsis thaliana At2g13270 mRNA, partial sequence | NA | coding protein | psRNATarget | |||||||||
EF183309.1 |
|
2.5 | Arabidopsis thaliana clone asmbl_5245 unknown mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EF183308.1 |
|
2.5 | Arabidopsis thaliana clone asmbl_5244 unknown mRNA sequence | NA | coding protein | psRNATarget |