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BaseInfo

ncRNA ID novel_ath_miR569
Species Arabidopsis thaliana
Class miRNA
Genome position Chr4:3133964-3134040 [+]
Reference genome TAIR10
Source SRR3707785;SRR3707786;ERR973024
Length 24
Mature sequence(if miRNA) 1 - UCGACUGAGCUCGGUGAGCUGAUC - 24
Stem-loop(if miRNA) --  G  U       -   --       C A U    A   A
  UC AC GAGCUCG GUG  AGCUGAU G G ACUA CCC G
  || || ||||||| |||  ||||||| | | |||| |||
  AG UG UUCGAGC CAC  UCGACUG C C UGGU GGG C
UC  G  -       U   AG       A - -    -   U
Stem-loop sequence UCGACUGAGCUCGGUGAGCUGAUCGAGUACUAACCCAGCUGGGUGGUCCAGUCAGCUGACACUCGAGCUUGUGGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_116946.1
ncRNA:24   CUAGUCGAGUGGCUCGAGUCAGCU   1
  |||=||||||||||||||||||||
targets:1518   GAUUAGCUCACCGAGCUCAGUCGA   1541

0.0 Arabidopsis thaliana hypothetical protein partial mRNA hypothetical protein(AT4G08760) coding protein psRNATarget