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BaseInfo

ncRNA ID	novel_ath_miR536
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr1:19582482-19582546 [-]
Reference genome	TAIR10
Source	SRR3178444
Length	21
Mature sequence(if miRNA)	45 - AUUUAUGUAUCACAAAUUAUA - 65
Stem-loop(if miRNA)	--                         -   AU   AUUUAUGUAUCACAAAUUAUAUACU AUA  A   ||||||||||||||||||||||||| |||   UAAAUACAUAGUGUUUAAUAUAUGA UAU  U GU                         A   CA
Stem-loop sequence	AUUUAUGUAUCACAAAUUAUAUACUAUAAUAUACUAUAAGUAUAUAAUUUGUGAUACAUAAAUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_129545.5	ncRNA:21   AUAUUAAACACUAUGUAUUUA   1   |=|*||||||||||||||||| targets:1622   UGUUAUUUGUGAUACAUAAAU   1642 Target Full Sequence	1.0	Arabidopsis thaliana hypothetical protein mRNA	hypothetical protein(AT2G39870)	coding protein	psRNATarget
AF370134.1	ncRNA:21   AUAUUAAACACUAUGUAUUUA   1   |=|*||||||||||||||||| targets:1460   UGUUAUUUGUGAUACAUAAAU   1480 Target Full Sequence	1.0	Arabidopsis thaliana unknown protein (At2g39870) mRNA, complete cds	NA	coding protein	psRNATarget
BX819393.1	ncRNA:21   AUAUUAAACACUAUGUAUUUA   1   |=|*||||||||||||||||| targets:1355   UGUUAUUUGUGAUACAUAAAU   1375 Target Full Sequence	1.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB74ZD11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AY065038.1	ncRNA:21   AUAUUAAACACUAUGUAUUUA   1   |=|*||||||||||||||||| targets:1368   UGUUAUUUGUGAUACAUAAAU   1388 Target Full Sequence	1.0	Arabidopsis thaliana At2g39870/T5I7.17 mRNA, complete cds	NA	coding protein	psRNATarget
NM_180435.4	ncRNA:21   AUAUU---AAACACUAUGUAUUUA   1   |*|||---|||||||||||||||| targets:36   UUUAAAUUUUUGUGAUACAUAAAU   59 Target Full Sequence	3.0	Arabidopsis thaliana Nuclear transport factor 2 (NTF2) family protein mRNA	Nuclear transport factor 2 (NTF2) family protein(AT5G04830)	coding protein	psRNATarget