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BaseInfo

ncRNA ID	novel_ath_miR535
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr1:24618318-24618482 [+]
Reference genome	TAIR10
Source	SRR3178444;SRR3178445;SRR1262546
Length	21
Mature sequence(if miRNA)	145 - AGAUGAAGUGAAUGGUAUAUU - 165
Stem-loop(if miRNA)	--          UAUC    G  C     C     ---UGA         A    --AC    A A      CC    C      C   UAUGCCAUUC    CGUC GC AACCC UAGUU      GUUUAGCUC GCUA    AUAG G UGUUUU  GGUG AAAAAG A   ||||||||||    |||| || ||||| |||||      ||||||||| ||||    |||| | ||||||  |||| ||||||   AUAUGGUAAG    GUAG CG UUGGG AUCAG      CGAAUCGAG CGAU    UAUC C AUAAGA  UCGC UUUUUC U UU          UGAA    A  A     U     CAGGUA         C    CACC    - -      AA    A      A
Stem-loop sequence	UAUGCCAUUCUAUCCGUCGGCCAACCCCUAGUUUGAGUUUAGCUCAGCUAACAUAGAGAUGUUUUCCGGUGCAAAAAGCAUACUUUUUACGCUAAAGAAUACCUAUCCACUAGCCGAGCUAAGCAUGGACGACUAUGGGUUAGCAGAUGAAGUGAAUGGUAUAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_125550.4	ncRNA:21   UUAUAUGGUAAGUGAAGUAGA   1   **||||=||||=||||||||| targets:101   UCUAUAUCAUUUACUUCAUCU   121 Target Full Sequence	2.5	Arabidopsis thaliana Protein kinase superfamily protein mRNA	Protein kinase superfamily protein(AT5G61570)	coding protein	psRNATarget