ncRNA ID | novel_ath_miR534 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr1:20449169-20449233 [+] |
Reference genome | TAIR10 |
Source | SRR3178444;SRR3178445 |
Length | 21 |
Mature sequence(if miRNA) | 45 - GAAACGAAAAAGUCAAUUAUG - 65 |
Stem-loop(if miRNA) |
--                     UUCUUCUCU   UGAUUGACUUUUUCGUUUUUU         U   |||||||||||||||||||||         U   AUUAACUGAAAAAGCAAAGAA         A GU                     UUACUAUUU |
Stem-loop sequence | UGAUUGACUUUUUCGUUUUUUUUCUUCUCUUUAUUUAUCAUUAAGAAACGAAAAAGUCAAUUAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001161077.2 |
|
2.5 | Arabidopsis thaliana transmembrane protein mRNA | transmembrane protein(AT2G33175) | coding protein | psRNATarget |