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BaseInfo

ncRNA ID novel_ath_miR534
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:20449169-20449233 [+]
Reference genome TAIR10
Source SRR3178444;SRR3178445
Length 21
Mature sequence(if miRNA) 45 - GAAACGAAAAAGUCAAUUAUG - 65
Stem-loop(if miRNA) --                     UUCUUCUCU
  UGAUUGACUUUUUCGUUUUUU         U
  |||||||||||||||||||||         U
  AUUAACUGAAAAAGCAAAGAA         A
GU                     UUACUAUUU
Stem-loop sequence UGAUUGACUUUUUCGUUUUUUUUCUUCUCUUUAUUUAUCAUUAAGAAACGAAAAAGUCAAUUAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001161077.2
ncRNA:21   GUAUUAACUGAAAAAGCAAAG   1
  |=|||||*|||||*|||||||
targets:838   CGUAAUUUACUUUAUCGUUUC   858

2.5 Arabidopsis thaliana transmembrane protein mRNA transmembrane protein(AT2G33175) coding protein psRNATarget