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BaseInfo

ncRNA ID	novel_ath_miR516
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr4:840921-840996 [-]
Reference genome	TAIR10
Source	SRR3178442
Length	25
Mature sequence(if miRNA)	52 - AACCGAAACAUAAUCUAAACUAAAC - 76
Stem-loop(if miRNA)	--                    U     GAUAUUA   A   AACCGAAACAUAAUCUAAAC AAACC       UAG U   |||||||||||||||||||| |||||       |||   UUGGCUUUGUAUUAGAUUUG UUUGG       GUC A GU                    -     -AUUCAA   A
Stem-loop sequence	AACCGAAACAUAAUCUAAACUAAACCGAUAUUAUAGAUAACUGAACUUAGGUUUGUUUAGAUUAUGUUUCGGUUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK230166.1	ncRNA:25   CAAAUCAAAUCUAAUACAAAGCCAA   1   |||*=||||*|=||||||||||||| targets:1038   GUUCGGUUUCGGUUAUGUUUCGGUU   1062 Target Full Sequence	2.0	Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-88-K03	NA	coding protein	psRNATarget
NM_129609.3	ncRNA:25   CAAAU----CAAAUCUAAUACAAAGCCAA   1   |||||----||||*||||||*|||||||| targets:1103   GUUUAUCAUGUUUUGAUUAUUUUUCGGUU   1131 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (ASG8), mRNA	hypothetical protein(ASG8)	coding protein	psRNATarget
AY085098.1	ncRNA:25   CAAAU----CAAAUCUAAUACAAAGCCAA   1   |||||----||||*||||||*|||||||| targets:939   GUUUAUCAUGUUUUGAUUAUUUUUCGGUU   967 Target Full Sequence	2.5	Arabidopsis thaliana clone 12956 mRNA, complete sequence	NA	coding protein	psRNATarget