ncRNA ID | novel_ath_miR514 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr2:9584194-9584269 [+] |
Reference genome | TAIR10 |
Source | SRR3178442 |
Length | 21 |
Mature sequence(if miRNA) | 56 - AUAUGGUUUGAAACUUUGCUU - 76 |
Stem-loop(if miRNA) |
--                        CGA   AUUA  U   GCAAAGUUUCAAACCAUAUUCAUA   UUC    UG U   ||||||||||||||||||||||||   |||    ||   CGUUUCAAAGUUUGGUAUAAGUAU   AAG    AC A UU                        --A   AACA  G |
Stem-loop sequence | GCAAAGUUUCAAACCAUAUUCAUACGAUUCAUUAUGUUAGCAACAAGAAAUAUGAAUAUGGUUUGAAACUUUGCUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001341719.1 |
|
1.0 | Arabidopsis thaliana secE/sec61-gamma protein transport protein mRNA | secE/sec61-gamma protein transport protein(AT4G24920) | coding protein | psRNATarget | |||||||||
NM_118624.4 |
|
1.0 | Arabidopsis thaliana secE/sec61-gamma protein transport protein mRNA | secE/sec61-gamma protein transport protein(AT4G24920) | coding protein | psRNATarget |