ncRNA ID | novel_ath_miR506 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr5:16040780-16040893 [-] |
Reference genome | TAIR10 |
Source | SRR3178441 |
Length | 19 |
Mature sequence(if miRNA) | 1 - AGAAGUUAGCUUUCCACUC - 19 |
Stem-loop(if miRNA) |
-GGA           AA    U    C          -----AG   UGAUCAUCAGUU     GGAAAGCUAAC  CUUU ACUC AUUUUGGCAA       AAC            G     |||||||||||  |||| |||| ||||||||||       |||     CCUUUCGAUUG  GAAA UGAG UAAAACCGUU       ACA            C CUCA           AA    U    U          AAUACUU   UCAUUGUUUUUA |
Stem-loop sequence | GGAGGAAAGCUAACAACUUUUACUCCAUUUUGGCAAAGAACUGAUCAUCAGUUGCAUUUUUGUUACUACAUUCAUAAUUGCCAAAAUUGAGUUAAAGAAGUUAGCUUUCCACUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_123748.3 |
|
2.5 | Arabidopsis thaliana Stabilizer of iron transporter SufD / Polynucleotidyl transferase (AGO10), mRNA | Stabilizer of iron transporter SufD / Polynucleotidyl transferase(AGO10) | coding protein | psRNATarget |