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BaseInfo

ncRNA ID novel_ath_miR506
Species Arabidopsis thaliana
Class miRNA
Genome position Chr5:16040780-16040893 [-]
Reference genome TAIR10
Source SRR3178441
Length 19
Mature sequence(if miRNA) 1 - AGAAGUUAGCUUUCCACUC - 19
Stem-loop(if miRNA) -GGA           AA    U    C          -----AG   UGAUCAUCAGUU
    GGAAAGCUAAC  CUUU ACUC AUUUUGGCAA       AAC            G
    |||||||||||  |||| |||| ||||||||||       |||
    CCUUUCGAUUG  GAAA UGAG UAAAACCGUU       ACA            C
CUCA           AA    U    U          AAUACUU   UCAUUGUUUUUA
Stem-loop sequence GGAGGAAAGCUAACAACUUUUACUCCAUUUUGGCAAAGAACUGAUCAUCAGUUGCAUUUUUGUUACUACAUUCAUAAUUGCCAAAAUUGAGUUAAAGAAGUUAGCUUUCCACUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_123748.3
ncRNA:19   CUCACCUUUCGAUUGAAGA   1
  |||*|||||||||*|||||
targets:215   GAGAGGAAAGCUAUCUUCU   233

2.5 Arabidopsis thaliana Stabilizer of iron transporter SufD / Polynucleotidyl transferase (AGO10), mRNA Stabilizer of iron transporter SufD / Polynucleotidyl transferase(AGO10) coding protein psRNATarget