ncRNA ID | ath-miRf10486-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - GACACCCUGAUGCAUCGAUC - NA |
Stem-loop(if miRNA) |
   G            CA  G A         A          -----------UCU    UAAUUUCCUUCUCCUCUGUGAAAUU GCU GGUGUUGAUCGA  UG G UGGGGUGUC AUCGACACCA              GGAA                         G ||| ||||||||||||  || | ||||||||| ||||||||||              |||| UGA UCACAGCUAGCU  AC U GUCCCACAG UAGCUGUGGU              GAGA                         U    G            --  G A         C          UAAUGAGAACUGCU    CAAAACGGAAACAGCUCACCUUAGC |
Stem-loop sequence | GCUGGGUGUUGAUCGACAUGGGAUGGGGUGUCAAUCGACACCAUCUGGAAUAAUUUCCUUCUCCUCUGUGAAAUUGUCGAUUCCACUCGACAAAGGCAAAACAGAGUCGUCAAGAGUAAUUGGUGUCGAUCGACACCCUGAUGCAUCGAUCGACACUGAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_103963.1 |
|
2.5 | Arabidopsis thaliana aminotransferase-like, mobile domain protein partial mRNA | aminotransferase-like, mobile domain protein(AT1G50820) | coding protein | psRNATarget | |||||||||
NM_001333456.1 |
|
2.5 | Arabidopsis thaliana aminotransferase-like, mobile domain protein partial mRNA | aminotransferase-like, mobile domain protein(AT1G50820) | coding protein | psRNATarget |