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BaseInfo

ncRNA ID novel_ath_miR494
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:19582480-19582558 [+]
Reference genome TAIR10
Source SRR3178439
Length 21
Mature sequence(if miRNA) 59 - UGAUACAUAAAUUGCAAAAUU - 79
Stem-loop(if miRNA) --                                U    U
  UUUUGCAAUUUAUGUAUCACAAAUUAUAUACU AUAG A
  |||||||||||||||||||||||||||||||| ||||
  AAAACGUUAAAUACAUAGUGUUUAAUAUAUGA UAUU U
UU                                -    A
Stem-loop sequence UUUUGCAAUUUAUGUAUCACAAAUUAUAUACUUAUAGUAUAUUAUAGUAUAUAAUUUGUGAUACAUAAAUUGCAAAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001341877.1
ncRNA:21   UUAAAACGUUAAAUACAUAGU   1
  |=*||||=||||||||||||*
targets:288   AGGUUUGUAAUUUAUGUAUCU   308

3.0 Arabidopsis thaliana Eukaryotic release factor 1 (eRF1) family protein (PEL1), mRNA Eukaryotic release factor 1 (eRF1) family protein(PEL1) coding protein psRNATarget