ncRNA ID | novel_ath_miR485 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr3:9856787-9856999 [-] |
Reference genome | TAIR10 |
Source | SRR3144591;SRR1312905 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UAACGAAAUGAUUACACAUUU - 21 |
Stem-loop(if miRNA) |
--      U     G   A     A    ---          U     AUAUGGCAUAUA         -------        ACAAUG     AAUAUAUA     -    G UA   AUGUGU AUCAU UCG UAAUC AUCA   UUCGACGAAU AUAGA            AAUGGUAUU       UGUUAGUA      ACAAC        UAGAU GAUA A  A   |||||| ||||| ||| ||||| ||||   |||||||||| |||||            |||||||||       ||||||||      |||||        ||||| |||| |   UACACA UAGUA AGC AUUAG UAGU   AAGCUGCUUA UGUCU            UUACCAUAA       ACAAUCAU      UGUUG        AUCUA CUGU U  A UU      U     A   A     A    UAU          U     GCUUUUUACACA         AUAUUAA        ---AUA     -------A     A    G UU |
Stem-loop sequence | AUGUGUUAUCAUGUCGAUAAUCAAUCAUUCGACGAAUUAUAGAAUAUGGCAUAUAAAUGGUAUUUGUUAGUAACAAUGACAACAAUAUAUAUAGAUGAUAGAUAAAUUUGUGUCAAUCUAAGUUGUAUAUACUAACAAAUUAUAAAUACCAUUACACAUUUUUCGUCUGUUAUUCGUCGAAUAUUGAUAGAUUAACGAAAUGAUUACACAUUU |