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BaseInfo

ncRNA ID novel_ath_miR485
Species Arabidopsis thaliana
Class miRNA
Genome position Chr3:9856787-9856999 [-]
Reference genome TAIR10
Source SRR3144591;SRR1312905
Length 21
Mature sequence(if miRNA) 1 - UAACGAAAUGAUUACACAUUU - 21
Stem-loop(if miRNA) --      U     G   A     A    ---          U     AUAUGGCAUAUA         -------        ACAAUG     AAUAUAUA     -    G UA
  AUGUGU AUCAU UCG UAAUC AUCA   UUCGACGAAU AUAGA            AAUGGUAUU       UGUUAGUA      ACAAC        UAGAU GAUA A  A
  |||||| ||||| ||| ||||| ||||   |||||||||| |||||            |||||||||       ||||||||      |||||        ||||| |||| |
  UACACA UAGUA AGC AUUAG UAGU   AAGCUGCUUA UGUCU            UUACCAUAA       ACAAUCAU      UGUUG        AUCUA CUGU U  A
UU      U     A   A     A    UAU          U     GCUUUUUACACA         AUAUUAA        ---AUA     -------A     A    G UU
Stem-loop sequence AUGUGUUAUCAUGUCGAUAAUCAAUCAUUCGACGAAUUAUAGAAUAUGGCAUAUAAAUGGUAUUUGUUAGUAACAAUGACAACAAUAUAUAUAGAUGAUAGAUAAAUUUGUGUCAAUCUAAGUUGUAUAUACUAACAAAUUAUAAAUACCAUUACACAUUUUUCGUCUGUUAUUCGUCGAAUAUUGAUAGAUUAACGAAAUGAUUACACAUUU