ncRNA ID | novel_ath_miR480 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr3:8873710-8873792 [-] |
Reference genome | TAIR10 |
Source | SRR3048748 |
Length | 21 |
Mature sequence(if miRNA) | 63 - UUCAUCACUUUGUUUUCGGUU - 83 |
Stem-loop(if miRNA) |
--     C   U       G       -A   A  -     G   UUCAU ACU UGUUUUC GUUAUAA  UAA AC AAUGC A   ||||| ||| ||||||| |||||||  ||| || ||||| U   GAGUA UGG ACAAAAG CGAUGUU  AUU UG UUAUG A UU     U   C       A       CC   A  A     U |
Stem-loop sequence | UUCAUCACUUUGUUUUCGGUUAUAAAUAAAACAAUGCGAUAUGUAUUAGUAUUACCUUGUAGCAGAAAACACGGUUAUGAGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001331877.1 |
|
3.0 | Arabidopsis thaliana amino acid permease 8 (AAP8), mRNA | amino acid permease 8(AAP8) | coding protein | psRNATarget | |||||||||
NM_100875.1 |
|
3.0 | Arabidopsis thaliana amino acid permease 8 (AAP8), partial mRNA | amino acid permease 8(AAP8) | coding protein | psRNATarget |