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BaseInfo

ncRNA ID novel_ath_miR474
Species Arabidopsis thaliana
Class miRNA
Genome position Chr2:5865648-5865701 [+]
Reference genome TAIR10
Source SRR3048747
Length 24
Mature sequence(if miRNA) 31 - GAGAAAGAAACGACGUCGUUUUGU - 54
Stem-loop(if miRNA) --                -A     CU
  AAAACGACGUCGUUUU  UCUCG  U
  ||||||||||||||||  |||||  U
  UUUUGCUGCAGCAAAG  AGAGU  U
UG                AA     CU
Stem-loop sequence AAAACGACGUCGUUUUAUCUCGCUUUUUCUGAGAAAGAAACGACGUCGUUUUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_130133.4
ncRNA:24   UGUUUUGCUGCAGCAAAGAAAGAG   1
  *|=|||||*||||||||||||||=
targets:61   CCGAAACGUCGUCGUUUCUUUCUU   84

2.0 Arabidopsis thaliana sterile alpha motif (SAM) domain-containing protein mRNA sterile alpha motif (SAM) domain-containing protein(AT2G45700) coding protein psRNATarget