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BaseInfo

ncRNA ID ath-miRf10483-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - GGUCGCCCUUGGUCGAGUAAA - NA
Stem-loop(if miRNA) CGA          UU   -    GA   AA    --- U  --U   AAGUCUGCGCCUUUGCCUGCAUGCUCUGAGUGAUCAAUUGGUCGAGUAGAUGCUUCUUCCUCUC
   UUGCUCGAUC  GGG GAUC  GUA  CAGG   G GC   GCA                                                                C
   ||||||||||  ||| ||||  |||  ||||   | ||   |||
   AAUGAGCUGG  CCC CUGG  AUG  AGAU   C UA   AAC                                                                U
GUA          UU   G    --   --    GUU -  AAC   UAGAUAGUUUCGGAGAAGCCUAGGAGGAGUAAGGGGUUAGUUGUUCUGUAGAUUCGUAUGUCUA
Stem-loop sequence CGAUUGCUCGAUCUUGGGGAUCGAGUAAACAGGGUGCUGCAAAGUCUGCGCCUUUGCCUGCAUGCUCUGAGUGAUCAAUUGGUCGAGUAGAUGCUUCUUCCUCUCCUAUCUGUAUGCUUAGAUGUCUUGUUGAUUGGGGAAUGAGGAGGAUCCGAAGAGGCUUUGAUAGAUCAACAAAUCUUGUAGAGUAGGUCGCCCUUGGUCGAGUAAAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_103341.1
ncRNA:21   AAAUGAGCUGGUUCCCGCUGG   1
  |||||||||=|||||||||||
targets:297   UUUACUCGAUCAAGGGCGACC   317

1.5 Arabidopsis thaliana hypothetical protein partial mRNA hypothetical protein(AT1G36756) coding protein psRNATarget
EF183314.1
ncRNA:21   AAAUGAGCUGGUUCCCGCUGG   1
  ||||||||||||||||=||||
targets:34   UUUACUCGACCAAGGGUGACC   54

1.5 Arabidopsis thaliana clone asmbl_5326 unknown mRNA sequence NA coding protein psRNATarget