ncRNA ID | ath-miRf10483-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - GGUCGCCCUUGGUCGAGUAAA - NA |
Stem-loop(if miRNA) |
CGA          UU   -    GA   AA    --- U  --U   AAGUCUGCGCCUUUGCCUGCAUGCUCUGAGUGAUCAAUUGGUCGAGUAGAUGCUUCUUCCUCUC    UUGCUCGAUC  GGG GAUC  GUA  CAGG   G GC   GCA                                                                C    ||||||||||  ||| ||||  |||  ||||   | ||   |||    AAUGAGCUGG  CCC CUGG  AUG  AGAU   C UA   AAC                                                                U GUA          UU   G    --   --    GUU -  AAC   UAGAUAGUUUCGGAGAAGCCUAGGAGGAGUAAGGGGUUAGUUGUUCUGUAGAUUCGUAUGUCUA |
Stem-loop sequence | CGAUUGCUCGAUCUUGGGGAUCGAGUAAACAGGGUGCUGCAAAGUCUGCGCCUUUGCCUGCAUGCUCUGAGUGAUCAAUUGGUCGAGUAGAUGCUUCUUCCUCUCCUAUCUGUAUGCUUAGAUGUCUUGUUGAUUGGGGAAUGAGGAGGAUCCGAAGAGGCUUUGAUAGAUCAACAAAUCUUGUAGAGUAGGUCGCCCUUGGUCGAGUAAAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_103341.1 |
|
1.5 | Arabidopsis thaliana hypothetical protein partial mRNA | hypothetical protein(AT1G36756) | coding protein | psRNATarget | |||||||||
EF183314.1 |
|
1.5 | Arabidopsis thaliana clone asmbl_5326 unknown mRNA sequence | NA | coding protein | psRNATarget |