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BaseInfo

ncRNA ID	novel_ath_miR471
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr3:6735446-6735532 [+]
Reference genome	TAIR10
Source	SRR2721745
Length	19
Mature sequence(if miRNA)	1 - UUUCGUGUUGUGAUGUUGA - 19
Stem-loop(if miRNA)	--UUUC    U     --GUU    --UCU     -  UUUU   C       GUGU GUGAU     GAAU     ACGGU CU    UGG U       |||| |||||     ||||     ||||| ||    ||| U       CACG CAUUA     UUUG     UGUCA GG    GCC U UUAAAA    U     AUGAU    UUUCU     C  -UAU   A
Stem-loop sequence	UUUCGUGUUGUGAUGUUGAAUUCUACGGUCUUUUUUGGCUUUACCGUAUGGCACUGUUCUUUGUUUUAGUAAUUACUGCACAAAAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BX825679.1	ncRNA:19   AGUUGUAGUGUUGUGCUUU   1   ||||*=||||||||||||= targets:61   UCAAAGUCACAACACGAAG   79 Target Full Sequence	3.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL55ZH07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AK228982.1	ncRNA:19   AGUUGUAGUGUUGUGCUUU   1   ||||*=||||||||||||= targets:72   UCAAAGUCACAACACGAAG   90 Target Full Sequence	3.0	Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-28-L20	NA	coding protein	psRNATarget
BT011607.1	ncRNA:19   AGUUGUAGUGUUGUGCUUU   1   ||||*=||||||||||||= targets:11   UCAAAGUCACAACACGAAG   29 Target Full Sequence	3.0	Arabidopsis thaliana At3g12830 mRNA, complete cds	NA	coding protein	psRNATarget
NM_112119.3	ncRNA:19   AGUUGUAGUGUUGUGCUUU   1   ||||*=||||||||||||= targets:91   UCAAAGUCACAACACGAAG   109 Target Full Sequence	3.0	Arabidopsis thaliana SAUR-like auxin-responsive protein family mRNA	SAUR-like auxin-responsive protein family(AT3G12830)	coding protein	psRNATarget