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BaseInfo

ncRNA ID novel_ath_miR470
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:6318338-6318415 [-]
Reference genome TAIR10
Source SRR2721745;ERR1337931;SRR3992484;SRR1265989
Length 21
Mature sequence(if miRNA) 1 - UUAUGUGAUACAUUGACCUCC - 21
Stem-loop(if miRNA) --  A              -U    AGU  U --    UG
  AG UCAAUGUAUUAUAU  AUAC   AG C  GGUU  C
  || ||||||||||||||  ||||   || |  ||||  U
  UC AGUUACAUAGUGUA  UGUG   UC G  CCAG  C
CC  C              UU    ACU  U AA    UU
Stem-loop sequence AGAUCAAUGUAUUAUAUUAUACAGUAGUCGGUUUGCUCUUGACCAAGUCUUCAGUGUUUAUGUGAUACAUUGACCUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BX813884.1
ncRNA:21   CCUCCAGUUACAUAGUGUAUU   1
  **||*||||*|||||||||||
targets:1306   AAAGUUCAAGGUAUCACAUAA   1326

2.5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB45ZD05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget