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BaseInfo

ncRNA ID	novel_ath_miR468
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr3:10354840-10354936 [+]
Reference genome	TAIR10
Source	SRR2721744;SRR2721745;SRR2721746;SRR3178440;SRR3707788;ERR1297303
Length	21
Mature sequence(if miRNA)	1 - AACUACAUUUAUAUAAAAAGA - 21
Stem-loop(if miRNA)	--                     ----------------       U   -UU   U   AACUACAUUUAUAUAAAAAGA                GAGAGAG AUA   UAU U   |||||||||||||||||||||                ||||||| |||   ||| A   UUGAUGUAAAUAUAUUUUUCU                UUCUUUU UGU   AUG C AU                     UCAUUAUUUACUAUUU       -   UCU   C
Stem-loop sequence	AACUACAUUUAUAUAAAAAGAGAGAGAGUAUAUUUAUUUACCGUAUCUUGUUUUUCUUUUUAUCAUUUAUUACUUCUUUUUAUAUAAAUGUAGUUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001338918.1	ncRNA:21   AGAAAAAUAUAUUUACAUCAA   1   ||||||||||||||||||||| targets:1767   UCUUUUUAUAUAAAUGUAGUU   1787 Target Full Sequence	0.0	Arabidopsis thaliana hypothetical protein mRNA	hypothetical protein(AT3G27906)	coding protein	psRNATarget
BX822902.1	ncRNA:21   AGAAAAAUAUAUUUACAUCAA   1   ||||||||||||||||||||| targets:1586   UCUUUUUAUAUAAAUGUAGUU   1606 Target Full Sequence	0.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB71ZB04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
NM_001343780.1	ncRNA:21   AGAAAAAUAUAUUUACAUCAA   1   ||||*||=||||||||||||| targets:291   UCUUAUUGUAUAAAUGUAGUU   311 Target Full Sequence	2.0	Arabidopsis thaliana transmembrane protein mRNA	transmembrane protein(AT5G22875)	coding protein	psRNATarget
BX833459.1	ncRNA:21   AGAAAAAUAUAUUUACAUCAA   1   ||||*||=||||||||||||| targets:201   UCUUAUUGUAUAAAUGUAGUU   221 Target Full Sequence	2.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL57ZC03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
NM_001339869.1	ncRNA:21   AGAAAAAUAUAUUUACAUCAA   1   |=|||||*|||||||||||*| targets:310   UUUUUUUCUAUAAAUGUAGAU   330 Target Full Sequence	2.5	Arabidopsis thaliana catalytic/ metal ion binding / metalloendopeptidase/ zinc ion binding protein mRNA	catalytic/ metal ion binding / metalloendopeptidase/ zinc ion binding protein(AT3G57460)	coding protein	psRNATarget