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BaseInfo

ncRNA ID novel_ath_miR454
Species Arabidopsis thaliana
Class miRNA
Genome position Chr3:14306786-14306899 [-]
Reference genome TAIR10
Source SRR2391661
Length 23
Mature sequence(if miRNA) 1 - AUCUUUUAAAACCCUUGUAAACC - 23
Stem-loop(if miRNA) --        A U            -----------               AACCC      A
  UUUACAAG G UUUUAAAGGAUU           UACAAGGAUUUUAAA     UUGUAA U
  |||||||| | ||||||||||||           |||||||||||||||     |||||| C
  AAAUGUUC C AAAAUUUUCUAA           AUGUUCCUAAAAUUU     AAUAUU U
CC        - C            AAAUUUAUCAA               -CCUA      U
Stem-loop sequence UUUACAAGAGUUUUUAAAGGAUUUACAAGGAUUUUAAAAACCCUUGUAAAUCUUUUAUAAAUCCUUUAAAAUCCUUGUAAACUAUUUAAAAAUCUUUUAAAACCCUUGUAAACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_114323.4
ncRNA:23   CC--AAAUGUUCCCAAAAUUUUCUA   1
  ||--||||*||||||||||||||||
targets:2490   GGAUUUUAAAAGGGUUUUAAAAGAU   2514

1.0 Arabidopsis thaliana fatty acid reductase 5 (FAR5), mRNA fatty acid reductase 5(FAR5) coding protein psRNATarget