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BaseInfo

ncRNA ID	novel_ath_miR445
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr2:3013111-3013263 [+]
Reference genome	TAIR10
Source	SRR2391659
Length	23
Mature sequence(if miRNA)	1 - GGGGGAUUGACAUGAAUGACACU - 23
Stem-loop(if miRNA)	--          C UG    -ACACU                 UAA    AAUAAUUUCUUUUCAAACUUCCAAAAA   GGGGGAUUGA A  AAUG      AAAAAAUUUUAUUAUUU   AAAU                           U   |||||||||| |  ||||      |||||||||||||||||   ||||   CCCUCUAACU U  UUAC      UUUUUUGAAAUAAUAAA   UUUA                           A AA          A GU    CAUUAU                 UUA    AAUAUCUCUUAAUUUUUAAAAUAUACG
Stem-loop sequence	GGGGGAUUGACAUGAAUGACACUAAAAAAUUUUAUUAUUUUAAAAAUAAUAAUUUCUUUUCAAACUUCCAAAAAUAGCAUAUAAAAUUUUUAAUUCUCUAUAAAUUUAUUAAAUAAUAAAGUUUUUUUAUUACCAUUUGUAUCAAUCUCCCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001203061.1	ncRNA:23   UCACAGUAAGUACAGUUAGGGGG   1   *||||||||||||||||||*||* targets:853   CGUGUCAUUCAUGUCAAUCACCA   875 Target Full Sequence	2.5	Arabidopsis thaliana Cysteine/Histidine-rich C1 domain family protein partial mRNA	Cysteine/Histidine-rich C1 domain family protein(AT3G27480)	coding protein	psRNATarget
NM_001338886.1	ncRNA:23   UCACAGUAAGUACAGUUAGGGGG   1   *||||||||||||||||||*||* targets:784   CGUGUCAUUCAUGUCAAUCACCA   806 Target Full Sequence	2.5	Arabidopsis thaliana Cysteine/Histidine-rich C1 domain family protein partial mRNA	Cysteine/Histidine-rich C1 domain family protein(AT3G27490)	coding protein	psRNATarget
NM_113664.3	ncRNA:23   UCACAGUAAGUACAGUUAGGGGG   1   *||||||||||||||||||*||* targets:902   CGUGUCAUUCAUGUCAAUCACCA   924 Target Full Sequence	2.5	Arabidopsis thaliana Cysteine/Histidine-rich C1 domain family protein mRNA	Cysteine/Histidine-rich C1 domain family protein(AT3G27480)	coding protein	psRNATarget
AY903952.1	ncRNA:23   UCACAGUAAGUACAGUUAGGGGG   1   *||||||||||||||||||*||* targets:856   CGUGUCAUUCAUGUCAAUCACCA   878 Target Full Sequence	2.5	Arabidopsis thaliana DC1 domain-containing protein (At3g27500) mRNA, complete cds	NA	coding protein	psRNATarget
NM_001338889.1	ncRNA:23   UCACAGUAAGUACAGUUAGGGGG   1   *||||||||||||||||||*||* targets:920   CGUGUCAUUCAUGUCAAUCACCA   942 Target Full Sequence	2.5	Arabidopsis thaliana Cysteine/Histidine-rich C1 domain family protein mRNA	Cysteine/Histidine-rich C1 domain family protein(AT3G27500)	coding protein	psRNATarget
NM_113665.2	ncRNA:23   UCACAGUAAGUACAGUUAGGGGG   1   *||||||||||||||||||*||* targets:898   CGUGUCAUUCAUGUCAAUCACCA   920 Target Full Sequence	2.5	Arabidopsis thaliana Cysteine/Histidine-rich C1 domain family protein mRNA	Cysteine/Histidine-rich C1 domain family protein(AT3G27490)	coding protein	psRNATarget
NM_001338888.1	ncRNA:23   UCACAGUAAGUACAGUUAGGGGG   1   *||||||||||||||||||*||* targets:924   CGUGUCAUUCAUGUCAAUCACCA   946 Target Full Sequence	2.5	Arabidopsis thaliana Cysteine/Histidine-rich C1 domain family protein mRNA	Cysteine/Histidine-rich C1 domain family protein(AT3G27500)	coding protein	psRNATarget
NM_113666.3	ncRNA:23   UCACAGUAAGUACAGUUAGGGGG   1   *||||||||||||||||||*||* targets:973   CGUGUCAUUCAUGUCAAUCACCA   995 Target Full Sequence	2.5	Arabidopsis thaliana Cysteine/Histidine-rich C1 domain family protein mRNA	Cysteine/Histidine-rich C1 domain family protein(AT3G27500)	coding protein	psRNATarget